[chimerax-users] Aligning small molecules, ligands

Noriega, Heather heather.noriega at bison.howard.edu
Fri Mar 11 08:04:12 PST 2022


Hello,

I hope you are well Elaine. I am wondering if there is a way to align my
combined model UNL to my model 2. In hopes this could be a reference model
of my docking done in Chimera for future builds. I did figure out the
bonding, thank you. :)

I attached the session, and have read the align command. I am just unsure
how to manipulate it to superimpose the ligand.

align matchatoms (the whole model 2) toAtoms (UNL on model 1).

Thanks for your help.


Thank you,

Heather Noriega
PhD-Pharmaceutical Science student
Howard University
heather.noriega at bison.howard.edu
520-203-1883
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