[chimerax-users] Selection of the organic ligand

Enrico Martinez jmsstarlight at gmail.com
Mon Mar 28 07:27:26 PDT 2022


Dear ChimeraX users!
Normally I use the selection name "ligand" to select all atoms of the
organic ligand. For example:
define centroid ligand name lig_com

sometimes depending on the pdb file, this command also selects one
residue (located in the pdb file just near the ligand), considering it
also as a part of the ligand.. May I use another selection to
explicitly exclude all 20 natural amino-acids from the ligand
selection?
Many thanks in advance!
Enrico


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