[chimerax-users] ligand not showing up

Greg Couch gregc at cgl.ucsf.edu
Tue Oct 4 13:52:49 PDT 2022


The coordinates are in the wrong columns for your HETATM residues.  
Remove the spaces after HETATM.

     -- Greg

On 10/4/22 13:19, Dr. Eddie via ChimeraX-users wrote:
> Hi all,
> I've got a pdb and I can't seem to get ChimeraX to recognize the 
> ligand (resname STR) at the end of the pdb. I've modified the ATOM to 
> be HETATM but it still does not show up. I hide solvent and the lipids 
> and I know where it should be (from seeing it in vmd) but only a void 
> is there. Any ideas what is wrong with the pdb?
> Thanks,
> Eddie
>
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