[chimerax-users] Unable to find the distance between centroid & any other atom in chimeraX

Eric Pettersen pett at cgl.ucsf.edu
Thu Jan 5 09:55:52 PST 2023


Hi Prathvi,
	Thanks for reporting this problem.  I have fixed it now, and the fix will be in tomorrow's daily build.  It would be slightly better if you reported bugs like this using the builtin bug-reporting mechanism (i.e. click "Report Bug" on the dialog you sent an image of) rather then sending it to the whole chimerax-users list.  The builtin bug-reporting includes a lot more information about your machine, ChimeraX installation, and the bug itself.  It didn't turn out to be needed in this case, but it often is needed.

--Eric

	Eric Pettersen
	UCSF Computer Graphics Lab


> On Jan 5, 2023, at 3:34 AM, Prathvi Singh via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
> 
> Hi Elaine,
> 
> I declared the centroid of a tyrosine residue's ring by first selecting its ring members & then using the command: define centroid sel radius 0.5
> 
> Next, when I try to find the distance between the centroid, I get an error whose screenshot I have attached with the email. The command that I am using to find the distance are:
> dist sel
> dist #1.1 #1.2 (here the distance is being calculated between two centroids)
> 
> Please help
> - 
> Prathvi Singh,
> Research Fellow,
> Department of Biological Sciences & Bioengineering,
> Indian Institute of Technology, Kanpur-208016
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