[chimerax-users] Importing pdb structures from OPM

Prathvi Singh prathvi at iitk.ac.in
Wed Mar 15 00:33:48 PDT 2023


Hi Elaine,

I was wondering where it is possible to use the "open" command to import
PDB structures of membrane proteins from OPM. I see in:
https://www.cgl.ucsf.edu/chimerax/docs/user/commands/open.html#fetch that
we can fetch data from various sources but OPM was not listed there. If
this were possible, we could directly import membrane protein structures
from OPM which have dummy residues that can be used to define membrane
boundaries via the *define plane *command.

Thank you

-- 
Prathvi Singh,
Research Fellow,
Department of Biological Sciences & Bioengineering,
Indian Institute of Technology, Kanpur-208016
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