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| 3 | Last time you used ChimeraX it crashed.
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| 4 | Please describe steps that led to the crash here.
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| 5 | Windows fatal exception: access violation
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| 6 |
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| 7 | Thread 0x00001e64 (most recent call first):
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| 8 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
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| 9 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 10 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 11 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 12 |
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| 13 | Thread 0x00004df4 (most recent call first):
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| 14 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
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| 15 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 16 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 17 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 18 |
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| 19 | Thread 0x000025f4 (most recent call first):
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| 20 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
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| 21 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\connection.py", line 884 in wait
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| 22 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
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| 23 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
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| 24 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 25 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 26 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 27 |
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| 28 | Thread 0x000035a8 (most recent call first):
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| 29 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 30 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 31 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 32 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 33 |
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| 34 | Thread 0x00002c38 (most recent call first):
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| 35 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 36 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 37 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 38 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 39 |
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| 40 | Thread 0x00001718 (most recent call first):
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| 41 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 42 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 43 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 44 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 45 |
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| 46 | Thread 0x000038d8 (most recent call first):
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| 47 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 48 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 49 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 50 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 51 |
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| 52 | Thread 0x00004484 (most recent call first):
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| 53 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 54 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 55 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 56 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 57 |
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| 58 | Thread 0x00002ec4 (most recent call first):
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| 59 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 60 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 61 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 62 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 63 |
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| 64 | Thread 0x000030c0 (most recent call first):
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| 65 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 66 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 67 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 68 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 69 |
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| 70 | Thread 0x00001374 (most recent call first):
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| 71 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 72 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 73 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 74 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 75 |
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| 76 | Thread 0x000024c0 (most recent call first):
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| 77 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 78 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 79 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 80 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 81 |
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| 82 | Thread 0x000025f0 (most recent call first):
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| 83 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 84 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 85 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 86 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 87 |
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| 88 | Thread 0x00001bc4 (most recent call first):
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| 89 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 90 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 91 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 92 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 93 |
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| 94 | Thread 0x00003010 (most recent call first):
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| 95 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\multiprocessing\pool.py", line 114 in worker
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| 96 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 910 in run
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| 97 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 973 in _bootstrap_inner
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| 98 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\threading.py", line 930 in _bootstrap
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| 99 |
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| 100 | Current thread 0x00001e10 (most recent call first):
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| 101 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\site-packages\chimerax\ui\gui.py", line 359 in _cleanup
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| 102 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\site-packages\chimerax\ui\gui.py", line 396 in cb
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| 103 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
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| 104 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\site-packages\ChimeraX_main.py", line 880 in init
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| 105 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\site-packages\ChimeraX_main.py", line 1029 in
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| 106 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\runpy.py", line 87 in _run_code
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| 107 | File "C:\Program Files\ChimeraX 1.3.dev202109240602\bin\lib\runpy.py", line 197 in _run_module_as_main
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| 108 | ===== Log before crash start =====
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| 109 | Startup Messages
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| 110 | ---
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| 111 | note | available bundle cache has not been initialized yet
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| 112 |
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| 113 | UCSF ChimeraX version: 1.3.dev202109240602 (2021-09-24)
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| 114 | © 2016-2021 Regents of the University of California. All rights reserved.
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| 115 | How to cite UCSF ChimeraX
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| 116 |
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| 117 | > open C:/Users/droug/Downloads/cryosparc_P52_J29_019_volume_map.mrc
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| 118 |
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| 119 | Opened cryosparc_P52_J29_019_volume_map.mrc as #1, grid size 256,256,256,
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| 120 | pixel 1.01, shown at level 0.144, step 1, values float32
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| 121 |
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| 122 | > open 7ahc
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| 123 |
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| 124 | 7ahc title:
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| 125 | OpuA apo inward-facing [more info...]
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| 126 |
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| 127 | Chain information for 7ahc #2
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| 128 | ---
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| 129 | Chain | Description | UniProt
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| 130 | A B | ABC transporter permease subunit | A0A0V8ETW8_LACLL
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| 131 | C D | ABC-type proline/glycine betaine transport system ATPase component |
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| 132 | A0A0R2NIU5_LACLL
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| 133 |
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| 134 |
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| 135 | > transparency #2 50
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| 136 |
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| 137 | > transparency #2 0
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| 138 |
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| 139 | > transparency #1 0
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| 140 |
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| 141 | > transparency #1 50
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| 142 |
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| 143 | > volume #1 level 0.1273
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| 144 |
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| 145 | > volume #1 level 0.144
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| 146 |
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| 147 | > open "C:/Users/droug/Downloads/cryosparc_P52_J29_001_volume_map (1).mrc"
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| 148 |
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| 149 | Opened cryosparc_P52_J29_001_volume_map (1).mrc as #3, grid size 256,256,256,
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| 150 | pixel 1.01, shown at level 0.194, step 1, values float32
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| 151 |
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| 152 | > close session
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| 153 |
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| 154 | > open C:/Users/droug/Downloads/cryosparc_P52_J27_001_volume_map_sharp.mrc
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| 155 |
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| 156 | Opened cryosparc_P52_J27_001_volume_map_sharp.mrc as #1, grid size
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| 157 | 256,256,256, pixel 1.01, shown at level 0.193, step 1, values float32
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| 158 |
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| 159 | > close session
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| 160 |
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| 161 |
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| 162 | ===== Log before crash end =====
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![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
