Changes between Initial Version and Version 1 of Ticket #18855


Ignore:
Timestamp:
Sep 24, 2025, 8:34:49 AM (3 months ago)
Author:
Eric Pettersen
Comment:

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #18855

    • Property Component Unassigned → Window Toolkit
    • Property Owner set to Tom Goddard
    • Property Platform → all
    • Property Project → ChimeraX
    • Property Status new → assigned
    • Property Summary ChimeraX bug report submission → Crash on Mac waking from sleep

  • Ticket #18855 – Description

    initial v1  
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    2272     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/_sw.cpython-311-darwin.so",
    2273     "name" : "_sw.cpython-311-darwin.so"
    2274   },
    2275   {
    2276     "source" : "P",
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    2278     "base" : 13765836800,
    2279     "size" : 16384,
    2280     "uuid" : "02f24514-9c56-3aa2-806f-b6eae4e7cf23",
    2281     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/libalign_algs.dylib",
    2282     "name" : "libalign_algs.dylib"
    2283   },
    2284   {
    2285     "source" : "P",
    2286     "arch" : "arm64",
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    2288     "size" : 16384,
    2289     "uuid" : "4e700338-6839-3c7c-9f41-a201e7f185e5",
    2290     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/dssp\/_dssp.cpython-311-darwin.so",
    2291     "name" : "_dssp.cpython-311-darwin.so"
    2292   },
    2293   {
    2294     "source" : "P",
    2295     "arch" : "arm64",
    2296     "base" : 13768704000,
    2297     "size" : 32768,
    2298     "uuid" : "93fd54d8-5d5e-319d-94c5-2702d533d751",
    2299     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/_nw.cpython-311-darwin.so",
    2300     "name" : "_nw.cpython-311-darwin.so"
    2301   },
    2302   {
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    2306     "size" : 49152,
    2307     "uuid" : "f4191524-316f-3e56-8aa1-9a441a05fd70",
    2308     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atom_search\/ast.cpython-311-darwin.so",
    2309     "name" : "ast.cpython-311-darwin.so"
    2310   },
    2311   {
    2312     "source" : "P",
    2313     "arch" : "arm64",
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    2315     "size" : 16384,
    2316     "uuid" : "55842977-c993-3cad-8767-f5c28e728b4d",
    2317     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/morph\/_morph.cpython-311-darwin.so",
    2318     "name" : "_morph.cpython-311-darwin.so"
    2319   },
    2320   {
    2321     "source" : "P",
    2322     "arch" : "arm64",
    2323     "base" : 13800751104,
    2324     "size" : 81920,
    2325     "uuid" : "d7bd530c-3353-37a6-b81f-ee3179d65811",
    2326     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lz4\/_version.cpython-311-darwin.so",
    2327     "name" : "_version.cpython-311-darwin.so"
    2328   },
    2329   {
    2330     "source" : "P",
    2331     "arch" : "arm64",
    2332     "base" : 13893255168,
    2333     "size" : 180224,
    2334     "uuid" : "87eed069-25fc-30f6-aa30-1e54859d92e2",
    2335     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lz4\/frame\/_frame.cpython-311-darwin.so",
    2336     "name" : "_frame.cpython-311-darwin.so"
    2337   },
    2338   {
    2339     "source" : "P",
    2340     "arch" : "arm64",
    2341     "base" : 13893533696,
    2342     "size" : 131072,
    2343     "uuid" : "c1a3c2d3-b21b-3231-839d-fcbc83ca2028",
    2344     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/core\/_serialize.cpython-311-darwin.so",
    2345     "name" : "_serialize.cpython-311-darwin.so"
    2346   },
    2347   {
    2348     "source" : "P",
    2349     "arch" : "arm64",
    2350     "base" : 13915013120,
    2351     "size" : 131072,
    2352     "uuid" : "650aead6-ce16-39bb-9ba1-4bf9986b96d6",
    2353     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/msgpack\/_cmsgpack.cpython-311-darwin.so",
    2354     "name" : "_cmsgpack.cpython-311-darwin.so"
    2355   },
    2356   {
    2357     "source" : "P",
    2358     "arch" : "arm64",
    2359     "base" : 13884424192,
    2360     "size" : 245760,
    2361     "uuid" : "8e9f6a06-78c8-3867-9c00-a99b6a0ce105",
    2362     "path" : "\/Applications\/ChimeraX-1.9.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/segment\/_segment.cpython-311-darwin.so",
    2363     "name" : "_segment.cpython-311-darwin.so"
    2364   },
    2365   {
    2366     "source" : "P",
    2367     "arch" : "arm64e",
    2368     "base" : 6648582144,
    2369     "size" : 243284,
    2370     "uuid" : "6e4a96ad-04b8-3e8a-b91d-087e62306246",
    2371     "path" : "\/usr\/lib\/system\/libsystem_kernel.dylib",
    2372     "name" : "libsystem_kernel.dylib"
    2373   },
    2374   {
    2375     "source" : "P",
    2376     "arch" : "arm64e",
    2377     "base" : 6648827904,
    2378     "size" : 51784,
    2379     "uuid" : "d6494ba9-171e-39fc-b1aa-28ecf87975d1",
    2380     "path" : "\/usr\/lib\/system\/libsystem_pthread.dylib",
    2381     "name" : "libsystem_pthread.dylib"
    2382   },
    2383   {
    2384     "source" : "P",
    2385     "arch" : "arm64e",
    2386     "base" : 6647349248,
    2387     "size" : 528964,
    2388     "uuid" : "dfea8794-80ce-37c3-8f6a-108aa1d0b1b0",
    2389     "path" : "\/usr\/lib\/system\/libsystem_c.dylib",
    2390     "name" : "libsystem_c.dylib"
    2391   },
    2392   {
    2393     "source" : "P",
    2394     "arch" : "arm64e",
    2395     "base" : 6649077760,
    2396     "size" : 32268,
    2397     "uuid" : "fd19a599-8750-31f9-924f-c2810c938371",
    2398     "path" : "\/usr\/lib\/system\/libsystem_platform.dylib",
    2399     "name" : "libsystem_platform.dylib"
    2400   },
    2401   {
    2402     "source" : "P",
    2403     "arch" : "arm64e",
    2404     "base" : 6715781120,
    2405     "CFBundleShortVersionString" : "6.9",
    2406     "CFBundleIdentifier" : "com.apple.AppKit",
    2407     "size" : 21564992,
    2408     "uuid" : "860c164c-d04c-30ff-8c6f-e672b74caf11",
    2409     "path" : "\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit",
    2410     "name" : "AppKit",
    2411     "CFBundleVersion" : "2575.70.52"
    2412   },
    2413   {
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    2417     "CFBundleShortVersionString" : "1.600.0",
    2418     "CFBundleIdentifier" : "com.apple.SkyLight",
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    2420     "uuid" : "4e052846-80c2-38af-85bf-1482e070a32b",
    2421     "path" : "\/System\/Library\/PrivateFrameworks\/SkyLight.framework\/Versions\/A\/SkyLight",
    2422     "name" : "SkyLight"
    2423   },
    2424   {
    2425     "source" : "P",
    2426     "arch" : "arm64e",
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    2428     "size" : 288608,
    2429     "uuid" : "24ce0d89-4114-30c2-a81a-3db1f5931cff",
    2430     "path" : "\/usr\/lib\/system\/libdispatch.dylib",
    2431     "name" : "libdispatch.dylib"
    2432   },
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    2436     "base" : 6649307136,
    2437     "CFBundleShortVersionString" : "6.9",
    2438     "CFBundleIdentifier" : "com.apple.CoreFoundation",
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    2440     "uuid" : "8d45baee-6cc0-3b89-93fd-ea1c8e15c6d7",
    2441     "path" : "\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation",
    2442     "name" : "CoreFoundation",
    2443     "CFBundleVersion" : "3603"
    2444   },
    2445   {
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    2448     "base" : 6844710912,
    2449     "CFBundleShortVersionString" : "2.1.1",
    2450     "CFBundleIdentifier" : "com.apple.HIToolbox",
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    2452     "uuid" : "1a037942-11e0-3fc8-aad2-20b11e7ae1a4",
    2453     "path" : "\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox",
    2454     "name" : "HIToolbox"
    2455   },
    2456   {
    2457     "source" : "P",
    2458     "arch" : "arm64e",
    2459     "base" : 6645022720,
    2460     "size" : 636280,
    2461     "uuid" : "3247e185-ced2-36ff-9e29-47a77c23e004",
    2462     "path" : "\/usr\/lib\/dyld",
    2463     "name" : "dyld"
    2464   },
    2465   {
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    2467     "source" : "A",
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    2469     "uuid" : "00000000-0000-0000-0000-000000000000"
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    2475     "CFBundleShortVersionString" : "6.9",
    2476     "CFBundleIdentifier" : "com.apple.Foundation",
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    2478     "uuid" : "b9a92060-f21e-3ecf-9ded-94a65c68a6f4",
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    2482   }
     73[deleted to fit within ticket limits]
     74
    248375],
    248476  "sharedCache" : {
    … …  
    4528212060 atoms, 60 bonds, 6 residues, 3 models selected 
    45292121
    4530 > select add #3
    4531 
    4532 7751 atoms, 7906 bonds, 6 pseudobonds, 981 residues, 5 models selected 
    4533 
    4534 > select subtract #3
    4535 
    4536 40 atoms, 40 bonds, 4 residues, 2 models selected 
    4537 
    4538 > select add #4
    4539 
    4540 9207 atoms, 9386 bonds, 6 pseudobonds, 1174 residues, 4 models selected 
    4541 
    4542 > select subtract #4
    4543 
    4544 20 atoms, 20 bonds, 2 residues, 1 model selected 
    4545 
    4546 > show #!5 models
    4547 
    4548 > select clear
    4549 
    4550 Drag select of 13 atoms, 47 residues, 11 bonds 
    4551 
    4552 > ui mousemode right translate
    4553 
    4554 > select add #5
    4555 
    4556 5703 atoms, 5267 bonds, 2 pseudobonds, 1035 residues, 3 models selected 
    4557 
    4558 > select subtract #5
    4559 
    4560 191 atoms, 7 bonds, 25 residues, 1 model selected 
    4561 
    4562 > select add #1
    4563 
    4564 7088 atoms, 7232 bonds, 6 pseudobonds, 900 residues, 3 models selected 
    4565 
    4566 > select subtract #1
    4567 
    4568 Nothing selected 
    4569 
    4570 > ui mousemode right select
    4571 
    4572 > select add #1/F:170@CG
    4573 
    4574 1 atom, 1 residue, 1 model selected 
    4575 
    4576 > select up
    4577 
    4578 10 atoms, 10 bonds, 1 residue, 1 model selected 
    4579 
    4580 > ui tool show Contacts
    4581 
    4582 > contacts sel restrict cross ignoreHiddenModels true
    4583 
    4584 134 contacts 
    4585 
    4586 > hide #7 models
    4587 
    4588 > close #7
    4589 
    4590 > select add #1
    4591 
    4592 7088 atoms, 7232 bonds, 6 pseudobonds, 900 residues, 3 models selected 
    4593 
    4594 > select subtract #1
    4595 
    4596 Nothing selected 
    4597 
    4598 > hide #!5 models
    4599 
    4600 > show #!2 models
    4601 
    4602 > show #!3 models
    4603 
    4604 > show #!4 models
    4605 
    4606 > select #1,2,3,4/J,F:170
    4607 
    4608 80 atoms, 80 bonds, 8 residues, 4 models selected 
    4609 
    4610 > show sel atoms
    4611 
    4612 > select add #4
    4613 
    4614 9247 atoms, 9426 bonds, 6 pseudobonds, 1178 residues, 6 models selected 
    4615 
    4616 > select subtract #4
    4617 
    4618 60 atoms, 60 bonds, 6 residues, 3 models selected 
    4619 
    4620 > select add #3
    4621 
    4622 7751 atoms, 7906 bonds, 6 pseudobonds, 981 residues, 5 models selected 
    4623 
    4624 > select subtract #3
    4625 
    4626 40 atoms, 40 bonds, 4 residues, 2 models selected 
    4627 
    4628 > select add #2
    4629 
    4630 7671 atoms, 7828 bonds, 6 pseudobonds, 972 residues, 4 models selected 
    4631 
    4632 > select subtract #2
    4633 
    4634 20 atoms, 20 bonds, 2 residues, 1 model selected 
    4635 
    4636 > select add #1
    4637 
    4638 7088 atoms, 7232 bonds, 6 pseudobonds, 900 residues, 3 models selected 
    4639 
    4640 > select subtract #1
    4641 
    4642 Nothing selected 
    4643 
    4644 > hide #!4 models
    4645 
    4646 > hide #!3 models
    4647 
    4648 > hide #!2 models
    4649 
    4650 > show #!2 models
    4651 
    4652 > hide #!1 models
    4653 
    4654 > show #!3 models
    4655 
    4656 > select clear
    4657 
    4658 > show #!4 models
    4659 
    4660 > show #!5 models
    4661 
    4662 > hide #!5 models
    4663 
    4664 > hide #!4 models
    4665 
    4666 > show #!1 models
    4667 
    4668 > show #!4 models
    4669 
    4670 > morph #1,2
    4671 
    4672 models have different number of chains, 4 (Morph -
    4673 J252_GiGet3_IN_OneGet45_real_space_refined_003-coot-0.pdb #/C,Morph -
    4674 J252_GiGet3_IN_OneGet45_real_space_refined_003-coot-0.pdb #/E,Morph -
    4675 J252_GiGet3_IN_OneGet45_real_space_refined_003-coot-0.pdb #/F,Morph -
    4676 J252_GiGet3_IN_OneGet45_real_space_refined_003-coot-0.pdb #/J) and 5
    4677 (J254_GiGet3_IN_TwoGet45_real_space_refined_002-coot-0.pdb
    4678 #2/C,J254_GiGet3_IN_TwoGet45_real_space_refined_002-coot-0.pdb
    4679 #2/D,J254_GiGet3_IN_TwoGet45_real_space_refined_002-coot-0.pdb
    4680 #2/E,J254_GiGet3_IN_TwoGet45_real_space_refined_002-coot-0.pdb
    4681 #2/F,J254_GiGet3_IN_TwoGet45_real_space_refined_002-coot-0.pdb #2/J) 
    4682 
    4683 > hide #!4 models
    4684 
    4685 > hide #!3 models
    4686 
    4687 > hide #!2 models
    4688 
    4689 > show #!2 models
    4690 
    4691 > hide #!2 models
    4692 
    4693 > show #!2 models
    4694 
    4695 > hide #!2 models
    4696 
    4697 > hide #!1 models
    4698 
    4699 > show #!2 models
    4700 
    4701 > select add #2
    4702 
    4703 7651 atoms, 7808 bonds, 6 pseudobonds, 970 residues, 3 models selected 
    4704 
    4705 > show sel cartoons
    4706 
    4707 > select clear
    4708 
    4709 Drag select of 173 residues 
    4710 Drag select of 25 residues 
    4711 
    4712 > select up
    4713 
    4714 1854 atoms, 1886 bonds, 240 residues, 1 model selected 
    4715 
    4716 > select up
    4717 
    4718 2548 atoms, 2598 bonds, 326 residues, 1 model selected 
    4719 
    4720 > select up
    4721 
    4722 7651 atoms, 7808 bonds, 970 residues, 1 model selected 
    4723 
    4724 > select down
    4725 
    4726 2548 atoms, 2598 bonds, 326 residues, 1 model selected 
    4727 
    4728 > delete sel
    4729 
    4730 > hide #!2 models
    4731 
    4732 > show #!1 models
    4733 
    4734 > select add #1
    4735 
    4736 7088 atoms, 7232 bonds, 6 pseudobonds, 900 residues, 3 models selected 
    4737 
    4738 > show sel cartoons
    4739 
    4740 > select clear
    4741 
    4742 Drag select of 57 residues 
    4743 Drag select of 148 residues 
    4744 
    4745 > select up
    4746 
    4747 1065 atoms, 1083 bonds, 140 residues, 1 model selected 
    4748 
    4749 > select up
    4750 
    4751 1968 atoms, 2005 bonds, 254 residues, 1 model selected 
    4752 
    4753 > delete sel
    4754 
    4755 > view
    4756 
    4757 > morph #1,2
    4758 
    4759 Computed 51 frame morph #7 
    4760 
    4761 > coordset #7 1,51
    4762 
    4763 > close #7
    4764 
    4765 > show #!3 models
    4766 
    4767 > show #!4 models
    4768 
    4769 > show #!3-4 cartoons
    4770 
    4771 Drag select of 327 residues 
    4772 Drag select of 188 residues 
    4773 
    4774 > select up
    4775 
    4776 4252 atoms, 4324 bonds, 555 residues, 2 models selected 
    4777 
    4778 > select up
    4779 
    4780 6484 atoms, 6608 bonds, 834 residues, 2 models selected 
    4781 
    4782 > delete sel
    4783 
    4784 > morph #1,2,3,4
    4785 
    4786 Computed 151 frame morph #7 
    4787 
    4788 > coordset #7 1,151
    4789 
    4790 > morph #1,2,4
    4791 
    4792 Computed 101 frame morph #8 
    4793 
    4794 > coordset #8 1,101
    4795 
    4796 > hide #!7 models
    4797 
    4798 > preset cartoons/nucleotides ribbons/slabs
    4799 
    4800 Using preset: Cartoons/Nucleotides / Ribbons/Slabs 
    4801 Changed 0 atom styles 
    4802 Preset expands to these ChimeraX commands:
    4803 
    4804    
    4805    
    4806     show nucleic
    4807     hide protein|solvent|H
    4808     surf hide
    4809     style (protein|nucleic|solvent) & @@draw_mode=0 stick
    4810     ~worm
    4811     cartoon
    4812     cartoon style modeh def arrows t arrowshelix f arrowscale 2 wid 2 thick 0.4 sides 12 div 20
    4813     cartoon style ~(nucleic|strand) x round
    4814     cartoon style (nucleic|strand) x rect
    4815     nucleotides tube/slab shape box
    4816 
    4817  
    4818 Drag select of 3 residues 
    4819 
    4820 > select clear
    4821 
    4822 > select #8/F:169
    4823 
    4824 4 atoms, 3 bonds, 1 residue, 1 model selected 
    4825 
    4826 > select up
    4827 
    4828 94 atoms, 96 bonds, 12 residues, 1 model selected 
    4829 
    4830 > show sel atoms
    4831 
    4832 > select #8/J:169
    4833 
    4834 4 atoms, 3 bonds, 1 residue, 1 model selected 
    4835 
    4836 > select up
    4837 
    4838 94 atoms, 96 bonds, 12 residues, 1 model selected 
    4839 
    4840 > show sel atoms
    4841 
    4842 > view
    4843 
    4844 > select clear
    4845 
    4846 > color #!8 byhetero
    4847 
    4848 > hide #!8 models
    4849 
    4850 > morph #1,4
    4851 
    4852 Computed 51 frame morph #9 
    4853 
    4854 > coordset #9 1,51
    4855 
    4856 > show #!9 atoms
    4857 
    4858 > color #!9 byhetero
    4859 
    4860 > select add #9
    4861 
    4862 4981 atoms, 5083 bonds, 4 pseudobonds, 633 residues, 2 models selected 
    4863 
    4864 > select subtract #9
    4865 
    4866 Nothing selected 
    4867 
    4868 > select add #9
    4869 
    4870 4981 atoms, 5083 bonds, 4 pseudobonds, 633 residues, 2 models selected 
    4871 
    4872 > hide sel atoms
    4873 
    4874 > select #1,2,3,4/J,F:170
    4875 
    4876 80 atoms, 80 bonds, 8 residues, 4 models selected 
    4877 
    4878 > select add #4
    4879 
    4880 5311 atoms, 5416 bonds, 6 pseudobonds, 670 residues, 6 models selected 
    4881 
    4882 > select add #3
    4883 
    4884 10454 atoms, 10664 bonds, 12 pseudobonds, 1319 residues, 8 models selected 
    4885 
    4886 > select add #2
    4887 
    4888 15537 atoms, 15854 bonds, 18 pseudobonds, 1961 residues, 10 models selected 
    4889 
    4890 > select add #1
    4891 
    4892 20637 atoms, 21061 bonds, 24 pseudobonds, 2605 residues, 12 models selected 
    4893 
    4894 > select subtract #2
    4895 
    4896 15534 atoms, 15851 bonds, 18 pseudobonds, 1961 residues, 9 models selected 
    4897 
    4898 > select subtract #1
    4899 
    4900 10414 atoms, 10624 bonds, 12 pseudobonds, 1315 residues, 6 models selected 
    4901 
    4902 > select subtract #3
    4903 
    4904 5251 atoms, 5356 bonds, 6 pseudobonds, 664 residues, 3 models selected 
    4905 
    4906 > select subtract #4
    4907 
    4908 Nothing selected 
    4909 
    4910 > select add #9
    4911 
    4912 4981 atoms, 5083 bonds, 4 pseudobonds, 633 residues, 2 models selected 
    4913 
    4914 > select #9/J,F:170,142
    4915 
    4916 38 atoms, 36 bonds, 4 residues, 1 model selected 
    4917 
    4918 > show sel atoms
    4919 
    4920 > select add #9
    4921 
    4922 4981 atoms, 5083 bonds, 4 pseudobonds, 633 residues, 2 models selected 
    4923 
    4924 > select subtract #9
    4925 
    4926 Nothing selected 
    4927 
    4928 > select add #9/F:173
    4929 
    4930 11 atoms, 10 bonds, 1 residue, 1 model selected 
    4931 
    4932 > select add #9/F:141
    4933 
    4934 19 atoms, 17 bonds, 2 residues, 1 model selected 
    4935 
    4936 > show sel atoms
    4937 
    4938 > select add #9
    4939 
    4940 4981 atoms, 5083 bonds, 4 pseudobonds, 633 residues, 2 models selected 
    4941 
    4942 > select subtract #9
    4943 
    4944 Nothing selected 
    4945 
    4946 > select #9/J,F:170,142, 141, 173
    4947 
    4948 76 atoms, 72 bonds, 8 residues, 1 model selected 
    4949 
    4950 > show sel atoms
    4951 
    4952 > select add #9
    4953 
    4954 4981 atoms, 5083 bonds, 4 pseudobonds, 633 residues, 2 models selected 
    4955 
    4956 > select subtract #9
    4957 
    4958 Nothing selected 
    4959 
    4960 > ui mousemode right translate
    4961 
    4962 > show #!8 models
    4963 
    4964 > hide #!9 models
    4965 
    4966 > show #!7 models
    4967 
    4968 > hide #!8 models
    4969 
    4970 > hide #!7 models
    4971 
    4972 > show #!9 models
    4973 
    4974 > show #!8 models
    4975 
    4976 > hide #!9 models
    4977 
    4978 > show #!9 models
    4979 
    4980 > hide #!8 models
    4981 
    4982 > hide #!9 models
    4983 
    4984 > show #!5 models
    4985 
    4986 > show #!4 models
    4987 
    4988 > show #!3 models
    4989 
    4990 > hide #!5 models
    4991 
    4992 > hide #!4 models
    4993 
    4994 > hide #!3 models
    4995 
    4996 > show #!2 models
    4997 
    4998 > show #!1 models
    4999 
    5000 > hide #!2 models
    5001 
    5002 > hide #!1 models
    5003 
    5004 > show #!7 models
    5005 
    5006 > show #!8 models
    5007 
    5008 > hide #!7 models
    5009 
    5010 > show #!9 models
    5011 
    5012 > hide #!8 models
    5013 
    5014 > show #!1 models
    5015 
    5016 > hide #!9 models
    5017 
    5018 > show #!4 models
    5019 
    5020 > hide #!4 models
    5021 
    5022 > hide #!1 models
    5023 
    5024 > show #!9 models
    5025 
    5026 > hide #!9 models
    5027 
    5028 > show #!7 models
    5029 
    5030 > hide #!7 models
    5031 
    5032 > show #!5 models
    5033 
    5034 > show #!1 models
    5035 
    5036 > hide #!5 models
    5037 
    5038 > hide #!1 models
    5039 
    5040 > morph #5,1
    5041 
    5042 Computed 51 frame morph #10 
    5043 
    5044 > coordset #10 1,51
    5045 
    5046 > hide #!10 models
    5047 
    5048 > show #!9 models
    5049 
    5050 > close #10
    5051 
    5052 > show #!8 models
    5053 
    5054 > hide #!9 models
    5055 
    5056 > hide #!8 models
    5057 
    5058 > show #!9 models
    5059 
    5060 > show #!8 models
    5061 
    5062 > hide #!9 models
    5063 
    5064 > show #!7 models
    5065 
    5066 > hide #!8 models
    5067 
    5068 > select #7/J,F:170,142, 141, 173
    5069 
    5070 76 atoms, 72 bonds, 8 residues, 1 model selected 
    5071 
    5072 > show sel atoms
    5073 
    5074 > color sel byhetero
    5075 
    5076 > select add #7
    5077 
    5078 4915 atoms, 5017 bonds, 4 pseudobonds, 624 residues, 2 models selected 
    5079 
    5080 > select subtract #7
    5081 
    5082 Nothing selected 
    5083 
    5084 > show #!8 models
    5085 
    5086 > show #!9 models
    5087 
    5088 > hide #!8 models
    5089 
    5090 > hide #!7 models
    5091 
    5092 > show #!7 models
    5093 
    5094 > hide #!9 models
    5095 
    5096 > show #!9 models
    5097 
    5098 > hide #!7 models
    5099 
    5100 > show #!8 models
    5101 
    5102 > hide #!9 models
    5103 
    5104 > show #!9 models
    5105 
    5106 > hide #!8 models
    5107 
    5108 > hide #!9 models
    5109 
    5110 > show #!8 models
    5111 
    5112 > hide #!8 models
    5113 
    5114 > show #!7 models
    5115 
    5116 > show #!8 models
    5117 
    5118 > hide #!7 models
    5119 
    5120 > hide #!8 models
    5121 
    5122 > show #!9 models
    5123 
    5124 > save /Users/victor/Desktop/Get3_Morph.cxs includeMaps true
    5125 
    5126 > hide #!9 models
    5127 
    5128 > open
    5129 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_39_00036_volume.mrc
    5130 
    5131 Opened J271_class_39_00036_volume.mrc as #10, grid size 96,96,96, pixel 2.84,
    5132 shown at level 0.0685, step 1, values float32 
    5133 
    5134 > open
    5135 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_38_00036_volume.mrc
    5136 
    5137 Opened J271_class_38_00036_volume.mrc as #11, grid size 96,96,96, pixel 2.84,
    5138 shown at level 0.0681, step 1, values float32 
    5139 
    5140 > open
    5141 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_37_00036_volume.mrc
    5142 
    5143 Opened J271_class_37_00036_volume.mrc as #12, grid size 96,96,96, pixel 2.84,
    5144 shown at level 0.0684, step 1, values float32 
    5145 
    5146 > open
    5147 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_36_00036_volume.mrc
    5148 
    5149 Opened J271_class_36_00036_volume.mrc as #13, grid size 96,96,96, pixel 2.84,
    5150 shown at level 0.0684, step 1, values float32 
    5151 
    5152 > open
    5153 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_35_00036_volume.mrc
    5154 
    5155 Opened J271_class_35_00036_volume.mrc as #14, grid size 96,96,96, pixel 2.84,
    5156 shown at level 0.0673, step 1, values float32 
    5157 
    5158 > open
    5159 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_34_00036_volume.mrc
    5160 
    5161 Opened J271_class_34_00036_volume.mrc as #15, grid size 96,96,96, pixel 2.84,
    5162 shown at level 0.0673, step 1, values float32 
    5163 
    5164 > open
    5165 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_33_00036_volume.mrc
    5166 
    5167 Opened J271_class_33_00036_volume.mrc as #16, grid size 96,96,96, pixel 2.84,
    5168 shown at level 0.0689, step 1, values float32 
    5169 
    5170 > open
    5171 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_32_00036_volume.mrc
    5172 
    5173 Opened J271_class_32_00036_volume.mrc as #17, grid size 96,96,96, pixel 2.84,
    5174 shown at level 0.0676, step 1, values float32 
    5175 
    5176 > open
    5177 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_31_00036_volume.mrc
    5178 
    5179 Opened J271_class_31_00036_volume.mrc as #18, grid size 96,96,96, pixel 2.84,
    5180 shown at level 0.0674, step 1, values float32 
    5181 
    5182 > open
    5183 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_30_00036_volume.mrc
    5184 
    5185 Opened J271_class_30_00036_volume.mrc as #19, grid size 96,96,96, pixel 2.84,
    5186 shown at level 0.0665, step 1, values float32 
    5187 
    5188 > open
    5189 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_29_00036_volume.mrc
    5190 
    5191 Opened J271_class_29_00036_volume.mrc as #20, grid size 96,96,96, pixel 2.84,
    5192 shown at level 0.0677, step 1, values float32 
    5193 
    5194 > open
    5195 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_28_00036_volume.mrc
    5196 
    5197 Opened J271_class_28_00036_volume.mrc as #21, grid size 96,96,96, pixel 2.84,
    5198 shown at level 0.0682, step 1, values float32 
    5199 
    5200 > open
    5201 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_27_00036_volume.mrc
    5202 
    5203 Opened J271_class_27_00036_volume.mrc as #22, grid size 96,96,96, pixel 2.84,
    5204 shown at level 0.0655, step 1, values float32 
    5205 
    5206 > open
    5207 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_26_00036_volume.mrc
    5208 
    5209 Opened J271_class_26_00036_volume.mrc as #23, grid size 96,96,96, pixel 2.84,
    5210 shown at level 0.0692, step 1, values float32 
    5211 
    5212 > open
    5213 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_25_00036_volume.mrc
    5214 
    5215 Opened J271_class_25_00036_volume.mrc as #24, grid size 96,96,96, pixel 2.84,
    5216 shown at level 0.0671, step 1, values float32 
    5217 
    5218 > open
    5219 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_24_00036_volume.mrc
    5220 
    5221 Opened J271_class_24_00036_volume.mrc as #25, grid size 96,96,96, pixel 2.84,
    5222 shown at level 0.0698, step 1, values float32 
    5223 
    5224 > open
    5225 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_23_00036_volume.mrc
    5226 
    5227 Opened J271_class_23_00036_volume.mrc as #26, grid size 96,96,96, pixel 2.84,
    5228 shown at level 0.0673, step 1, values float32 
    5229 
    5230 > open
    5231 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_22_00036_volume.mrc
    5232 
    5233 Opened J271_class_22_00036_volume.mrc as #27, grid size 96,96,96, pixel 2.84,
    5234 shown at level 0.0689, step 1, values float32 
    5235 
    5236 > open
    5237 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_21_00036_volume.mrc
    5238 
    5239 Opened J271_class_21_00036_volume.mrc as #28, grid size 96,96,96, pixel 2.84,
    5240 shown at level 0.068, step 1, values float32 
    5241 
    5242 > open
    5243 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_20_00036_volume.mrc
    5244 
    5245 Opened J271_class_20_00036_volume.mrc as #29, grid size 96,96,96, pixel 2.84,
    5246 shown at level 0.0664, step 1, values float32 
    5247 
    5248 > open
    5249 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_19_00036_volume.mrc
    5250 
    5251 Opened J271_class_19_00036_volume.mrc as #30, grid size 96,96,96, pixel 2.84,
    5252 shown at level 0.0676, step 1, values float32 
    5253 
    5254 > open
    5255 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_18_00036_volume.mrc
    5256 
    5257 Opened J271_class_18_00036_volume.mrc as #31, grid size 96,96,96, pixel 2.84,
    5258 shown at level 0.0698, step 1, values float32 
    5259 
    5260 > open
    5261 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_17_00036_volume.mrc
    5262 
    5263 Opened J271_class_17_00036_volume.mrc as #32, grid size 96,96,96, pixel 2.84,
    5264 shown at level 0.0651, step 1, values float32 
    5265 
    5266 > open
    5267 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_16_00036_volume.mrc
    5268 
    5269 Opened J271_class_16_00036_volume.mrc as #33, grid size 96,96,96, pixel 2.84,
    5270 shown at level 0.068, step 1, values float32 
    5271 
    5272 > open
    5273 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_15_00036_volume.mrc
    5274 
    5275 Opened J271_class_15_00036_volume.mrc as #34, grid size 96,96,96, pixel 2.84,
    5276 shown at level 0.0757, step 1, values float32 
    5277 
    5278 > open
    5279 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_14_00036_volume.mrc
    5280 
    5281 Opened J271_class_14_00036_volume.mrc as #35, grid size 96,96,96, pixel 2.84,
    5282 shown at level 0.0673, step 1, values float32 
    5283 
    5284 > open
    5285 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_13_00036_volume.mrc
    5286 
    5287 Opened J271_class_13_00036_volume.mrc as #36, grid size 96,96,96, pixel 2.84,
    5288 shown at level 0.0685, step 1, values float32 
    5289 
    5290 > open
    5291 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_12_00036_volume.mrc
    5292 
    5293 Opened J271_class_12_00036_volume.mrc as #37, grid size 96,96,96, pixel 2.84,
    5294 shown at level 0.0665, step 1, values float32 
    5295 
    5296 > open
    5297 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_11_00036_volume.mrc
    5298 
    5299 Opened J271_class_11_00036_volume.mrc as #38, grid size 96,96,96, pixel 2.84,
    5300 shown at level 0.0692, step 1, values float32 
    5301 
    5302 > open
    5303 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_10_00036_volume.mrc
    5304 
    5305 Opened J271_class_10_00036_volume.mrc as #39, grid size 96,96,96, pixel 2.84,
    5306 shown at level 0.0673, step 1, values float32 
    5307 
    5308 > open
    5309 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_09_00036_volume.mrc
    5310 
    5311 Opened J271_class_09_00036_volume.mrc as #40, grid size 96,96,96, pixel 2.84,
    5312 shown at level 0.0679, step 1, values float32 
    5313 
    5314 > open
    5315 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_08_00036_volume.mrc
    5316 
    5317 Opened J271_class_08_00036_volume.mrc as #41, grid size 96,96,96, pixel 2.84,
    5318 shown at level 0.0663, step 1, values float32 
    5319 
    5320 > open
    5321 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_07_00036_volume.mrc
    5322 
    5323 Opened J271_class_07_00036_volume.mrc as #42, grid size 96,96,96, pixel 2.84,
    5324 shown at level 0.0649, step 1, values float32 
    5325 
    5326 > open
    5327 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_06_00036_volume.mrc
    5328 
    5329 Opened J271_class_06_00036_volume.mrc as #43, grid size 96,96,96, pixel 2.84,
    5330 shown at level 0.0704, step 1, values float32 
    5331 
    5332 > open
    5333 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_05_00036_volume.mrc
    5334 
    5335 Opened J271_class_05_00036_volume.mrc as #44, grid size 96,96,96, pixel 2.84,
    5336 shown at level 0.0671, step 1, values float32 
    5337 
    5338 > open
    5339 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_04_00036_volume.mrc
    5340 
    5341 Opened J271_class_04_00036_volume.mrc as #45, grid size 96,96,96, pixel 2.84,
    5342 shown at level 0.0698, step 1, values float32 
    5343 
    5344 > open
    5345 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_03_00036_volume.mrc
    5346 
    5347 Opened J271_class_03_00036_volume.mrc as #46, grid size 96,96,96, pixel 2.84,
    5348 shown at level 0.0681, step 1, values float32 
    5349 
    5350 > open
    5351 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_02_00036_volume.mrc
    5352 
    5353 Opened J271_class_02_00036_volume.mrc as #47, grid size 96,96,96, pixel 2.84,
    5354 shown at level 0.0682, step 1, values float32 
    5355 
    5356 > open
    5357 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_01_00036_volume.mrc
    5358 
    5359 Opened J271_class_01_00036_volume.mrc as #48, grid size 96,96,96, pixel 2.84,
    5360 shown at level 0.0687, step 1, values float32 
    5361 
    5362 > open
    5363 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_00_00036_volume.mrc
    5364 
    5365 Opened J271_class_00_00036_volume.mrc as #49, grid size 96,96,96, pixel 2.84,
    5366 shown at level 0.0667, step 1, values float32 
    5367 
    5368 > hide #!10 models
    5369 
    5370 > show #!10 models
    5371 
    5372 > hide #!11 models
    5373 
    5374 > hide #!12 models
    5375 
    5376 > hide #!13 models
    5377 
    5378 > hide #!14 models
    5379 
    5380 > hide #!15 models
    5381 
    5382 > hide #!16 models
    5383 
    5384 > hide #!17 models
    5385 
    5386 > hide #!18 models
    5387 
    5388 > hide #!19 models
    5389 
    5390 > hide #!20 models
    5391 
    5392 > hide #!21 models
    5393 
    5394 > hide #!22 models
    5395 
    5396 > hide #!23 models
    5397 
    5398 > hide #!24 models
    5399 
    5400 > hide #!25 models
    5401 
    5402 > hide #!26 models
    5403 
    5404 > hide #!27 models
    5405 
    5406 > hide #!28 models
    5407 
    5408 > hide #!29 models
    5409 
    5410 > hide #!30 models
    5411 
    5412 > hide #!31 models
    5413 
    5414 > hide #!32 models
    5415 
    5416 > hide #!33 models
    5417 
    5418 > hide #!34 models
    5419 
    5420 > hide #!35 models
    5421 
    5422 > hide #!36 models
    5423 
    5424 > hide #!37 models
    5425 
    5426 > hide #!38 models
    5427 
    5428 > hide #!39 models
    5429 
    5430 > hide #!40 models
    5431 
    5432 > hide #!41 models
    5433 
    5434 > hide #!42 models
    5435 
    5436 > hide #!43 models
    5437 
    5438 > hide #!44 models
    5439 
    5440 > hide #!45 models
    5441 
    5442 > hide #!46 models
    5443 
    5444 > hide #!47 models
    5445 
    5446 > hide #!48 models
    5447 
    5448 > hide #!49 models
    5449 
    5450 > surface dust #10 size 28.4
    5451 
    5452 > volume #10 level 0.3689
    5453 
    5454 > hide #!10 models
    5455 
    5456 > show #!11 models
    5457 
    5458 > surface dust #11 size 28.4
    5459 
    5460 > volume #11 level 0.3254
    5461 
    5462 > show #!10 models
    5463 
    5464 > hide #!11 models
    5465 
    5466 > hide #!10 models
    5467 
    5468 > show #!11 models
    5469 
    5470 > hide #!11 models
    5471 
    5472 > show #!12 models
    5473 
    5474 > surface dust #12 size 28.4
    5475 
    5476 > volume #12 level 0.3732
    5477 
    5478 > hide #!12 models
    5479 
    5480 > show #!13 models
    5481 
    5482 > surface dust #13 size 28.4
    5483 
    5484 > volume #13 level 0.3479
    5485 
    5486 > surface dust #14 size 28.4
    5487 
    5488 > volume #14 level 0.3799
    5489 
    5490 > volume #15 level 0.1587
    5491 
    5492 > volume #15 level 0.1953
    5493 
    5494 > volume #15 level 0.3964
    5495 
    5496 > surface dust #16 size 28.4
    5497 
    5498 > volume #16 level 0.3844
    5499 
    5500 > volume #16 level 0.4343
    5501 
    5502 > volume #17 level 0.4096
    5503 
    5504 > volume #17 level 0.3312
    5505 
    5506 > volume #18 level 0.3706
    5507 
    5508 > volume #18 level 0.367
    5509 
    5510 > volume #19 level 0.2705
    5511 
    5512 > volume #19 level 0.4337
    5513 
    5514 > volume #20 level 0.4647
    5515 
    5516 > show #!19 models
    5517 
    5518 > hide #!20 models
    5519 
    5520 > show #!18 models
    5521 
    5522 > hide #!19 models
    5523 
    5524 > show #!17 models
    5525 
    5526 > hide #!18 models
    5527 
    5528 > show #!15 models
    5529 
    5530 > hide #!17 models
    5531 
    5532 > show #!16 models
    5533 
    5534 > hide #!15 models
    5535 
    5536 > volume #16 level 0.3014
    5537 
    5538 > volume #16 level 0.3113
    5539 
    5540 > show #!17 models
    5541 
    5542 > hide #!16 models
    5543 
    5544 > hide #!17 models
    5545 
    5546 > show #!17 models
    5547 
    5548 > show #!18 models
    5549 
    5550 > hide #!17 models
    5551 
    5552 > show #!17 models
    5553 
    5554 > hide #!17 models
    5555 
    5556 > volume #19 level 0.4296
    5557 
    5558 > surface dust #21 size 28.4
    5559 
    5560 > volume #21 level 0.2138
    5561 
    5562 > volume #21 level 0.3026
    5563 
    5564 > hide #!21 models
    5565 
    5566 > show #!22 models
    5567 
    5568 > surface dust #22 size 28.4
    5569 
    5570 > volume #22 level 0.3549
    5571 
    5572 > volume #22 level 0.182
    5573 
    5574 > hide #!22 models
    5575 
    5576 > show #!23 models
    5577 
    5578 > surface dust #23 size 28.4
    5579 
    5580 > volume #23 level 0.3248
    5581 
    5582 > show #!24 models
    5583 
    5584 > hide #!23 models
    5585 
    5586 > surface dust #24 size 28.4
    5587 
    5588 > volume #24 level 0.43
    5589 
    5590 > show #!25 models
    5591 
    5592 > hide #!24 models
    5593 
    5594 > volume #25 level 0.1928
    5595 
    5596 > surface dust #25 size 28.4
    5597 
    5598 > volume #25 level 0.3292
    5599 
    5600 > volume #25 level 0.3624
    5601 
    5602 > surface dust #26 size 28.4
    5603 
    5604 > volume #26 level 0.3287
    5605 
    5606 > show #!27 models
    5607 
    5608 > hide #!26 models
    5609 
    5610 > volume #27 level 0.3058
    5611 
    5612 > show #!28 models
    5613 
    5614 > hide #!27 models
    5615 
    5616 > surface dust #28 size 28.4
    5617 
    5618 > volume #28 level 0.418
    5619 
    5620 > show #!29 models
    5621 
    5622 > hide #!28 models
    5623 
    5624 > surface dust #29 size 28.4
    5625 
    5626 > volume #29 level 0.2865
    5627 
    5628 > volume #29 level 0.3984
    5629 
    5630 > hide #!29 models
    5631 
    5632 > show #!30 models
    5633 
    5634 > show #!29 models
    5635 
    5636 > hide #!30 models
    5637 
    5638 > show #!30 models
    5639 
    5640 > hide #!29 models
    5641 
    5642 > volume #30 level 0.3717
    5643 
    5644 > hide #!30 models
    5645 
    5646 > show #!31 models
    5647 
    5648 > surface dust #31 size 28.4
    5649 
    5650 > volume #31 level 0.3046
    5651 
    5652 > hide #!31 models
    5653 
    5654 > show #!32 models
    5655 
    5656 > volume #32 level 0.3058
    5657 
    5658 > surface dust #33 size 28.4
    5659 
    5660 > volume #33 level 0.3974
    5661 
    5662 > volume #33 level 0.2831
    5663 
    5664 > volume #33 level 0.3335
    5665 
    5666 > volume #34 level 0.1272
    5667 
    5668 > volume #35 level 0.4149
    5669 
    5670 > show #!36 models
    5671 
    5672 > hide #!35 models
    5673 
    5674 > volume #36 level 0.3973
    5675 
    5676 > show #!37 models
    5677 
    5678 > hide #!36 models
    5679 
    5680 > volume #37 level 0.4021
    5681 
    5682 > hide #!37 models
    5683 
    5684 > show #!37 models
    5685 
    5686 > volume #37 level 0.2999
    5687 
    5688 > hide #!37 models
    5689 
    5690 > show #!38 models
    5691 
    5692 > volume #38 level 0.171
    5693 
    5694 > surface dust #38 size 28.4
    5695 
    5696 > volume #38 level 0.2692
    5697 
    5698 > show #!39 models
    5699 
    5700 > hide #!38 models
    5701 
    5702 > volume #39 level 0.2772
    5703 
    5704 > surface dust #39 size 28.4
    5705 
    5706 > hide #!39 models
    5707 
    5708 > show #!40 models
    5709 
    5710 > volume #40 level 0.2734
    5711 
    5712 > surface dust #40 size 28.4
    5713 
    5714 > volume #40 level 0.3659
    5715 
    5716 > surface dust #41 size 28.4
    5717 
    5718 > volume #41 level 0.2069
    5719 
    5720 > volume #41 level 0.2964
    5721 
    5722 > hide #!41 models
    5723 
    5724 > show #!42 models
    5725 
    5726 > volume #42 level 0.2872
    5727 
    5728 > surface dust #42 size 28.4
    5729 
    5730 > volume #42 level 0.4378
    5731 
    5732 > show #!43 models
    5733 
    5734 > hide #!42 models
    5735 
    5736 > volume #43 level 0.2747
    5737 
    5738 > surface dust #43 size 28.4
    5739 
    5740 > hide #!43 models
    5741 
    5742 > show #!44 models
    5743 
    5744 > volume #44 level 0.2206
    5745 
    5746 > surface dust #44 size 28.4
    5747 
    5748 > volume #44 level 0.3186
    5749 
    5750 > surface dust #45 size 28.4
    5751 
    5752 > volume #45 level 0.3377
    5753 
    5754 > volume #46 level 0.4388
    5755 
    5756 > hide #!46 models
    5757 
    5758 > show #!47 models
    5759 
    5760 > surface dust #47 size 28.4
    5761 
    5762 > volume #47 level 0.368
    5763 
    5764 > hide #!47 models
    5765 
    5766 > show #!48 models
    5767 
    5768 > surface dust #48 size 28.4
    5769 
    5770 > volume #48 level 0.2557
    5771 
    5772 > show #!49 models
    5773 
    5774 > hide #!48 models
    5775 
    5776 > volume #49 level 0.1288
    5777 
    5778 > surface dust #49 size 28.4
    5779 
    5780 > volume #49 level 0.2977
    5781 
    5782 > close #10-49
    5783 
    5784 > show #!9 models
    5785 
    5786 > hide #!9 models
    5787 
    5788 > open
    5789 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_12_00115_volume.mrc
    5790 
    5791 Opened J274_class_12_00115_volume.mrc as #10, grid size 144,144,144, pixel
    5792 1.9, shown at level 0.115, step 1, values float32 
    5793 
    5794 > open
    5795 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_11_00115_volume.mrc
    5796 
    5797 Opened J274_class_11_00115_volume.mrc as #11, grid size 144,144,144, pixel
    5798 1.9, shown at level 0.0433, step 1, values float32 
    5799 
    5800 > open
    5801 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_10_00115_volume.mrc
    5802 
    5803 Opened J274_class_10_00115_volume.mrc as #12, grid size 144,144,144, pixel
    5804 1.9, shown at level 0.0464, step 1, values float32 
    5805 
    5806 > open
    5807 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_09_00115_volume.mrc
    5808 
    5809 Opened J274_class_09_00115_volume.mrc as #13, grid size 144,144,144, pixel
    5810 1.9, shown at level 0.0545, step 1, values float32 
    5811 
    5812 > open
    5813 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_08_00115_volume.mrc
    5814 
    5815 Opened J274_class_08_00115_volume.mrc as #14, grid size 144,144,144, pixel
    5816 1.9, shown at level 0.106, step 1, values float32 
    5817 
    5818 > open
    5819 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_07_00115_volume.mrc
    5820 
    5821 Opened J274_class_07_00115_volume.mrc as #15, grid size 144,144,144, pixel
    5822 1.9, shown at level 0.0471, step 1, values float32 
    5823 
    5824 > open
    5825 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_06_00115_volume.mrc
    5826 
    5827 Opened J274_class_06_00115_volume.mrc as #16, grid size 144,144,144, pixel
    5828 1.9, shown at level 0.0499, step 1, values float32 
    5829 
    5830 > open
    5831 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_05_00115_volume.mrc
    5832 
    5833 Opened J274_class_05_00115_volume.mrc as #17, grid size 144,144,144, pixel
    5834 1.9, shown at level 0.0444, step 1, values float32 
    5835 
    5836 > open
    5837 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_04_00115_volume.mrc
    5838 
    5839 Opened J274_class_04_00115_volume.mrc as #18, grid size 144,144,144, pixel
    5840 1.9, shown at level 0.0455, step 1, values float32 
    5841 
    5842 > open
    5843 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_03_00115_volume.mrc
    5844 
    5845 Opened J274_class_03_00115_volume.mrc as #19, grid size 144,144,144, pixel
    5846 1.9, shown at level 0.0493, step 1, values float32 
    5847 
    5848 > open
    5849 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_02_00115_volume.mrc
    5850 
    5851 Opened J274_class_02_00115_volume.mrc as #20, grid size 144,144,144, pixel
    5852 1.9, shown at level 0.0517, step 1, values float32 
    5853 
    5854 > open
    5855 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_01_00115_volume.mrc
    5856 
    5857 Opened J274_class_01_00115_volume.mrc as #21, grid size 144,144,144, pixel
    5858 1.9, shown at level 0.0663, step 1, values float32 
    5859 
    5860 > open
    5861 > /Users/victor/Downloads/cryosparc_P89_J274_00115_volume_series/J274_class_00_00115_volume.mrc
    5862 
    5863 Opened J274_class_00_00115_volume.mrc as #22, grid size 144,144,144, pixel
    5864 1.9, shown at level 0.0466, step 1, values float32 
    5865 
    5866 > surface dust #10 size 19
    5867 
    5868 > surface dust #11 size 19
    5869 
    5870 > surface dust #12 size 19
    5871 
    5872 > surface dust #13 size 19
    5873 
    5874 > surface dust #14 size 19
    5875 
    5876 > surface dust #15 size 19
    5877 
    5878 > surface dust #16 size 19
    5879 
    5880 > surface dust #17 size 19
    5881 
    5882 > surface dust #18 size 19
    5883 
    5884 > surface dust #19 size 19
    5885 
    5886 > surface dust #20 size 19
    5887 
    5888 > surface dust #21 size 19
    5889 
    5890 > surface dust #22 size 19
    5891 
    5892 > hide #!16 models
    5893 
    5894 > hide #!17 models
    5895 
    5896 > hide #!18 models
    5897 
    5898 > hide #!19 models
    5899 
    5900 > hide #!20 models
    5901 
    5902 > hide #!21 models
    5903 
    5904 > hide #!22 models
    5905 
    5906 > hide #!15 models
    5907 
    5908 > hide #!14 models
    5909 
    5910 > hide #!13 models
    5911 
    5912 > hide #!12 models
    5913 
    5914 > hide #!11 models
    5915 
    5916 > show #!11 models
    5917 
    5918 > hide #!10 models
    5919 
    5920 > volume #11 level 0.2279
    5921 
    5922 > volume #11 level 0.2757
    5923 
    5924 > show #!12 models
    5925 
    5926 > hide #!11 models
    5927 
    5928 > volume #12 level 0.1817
    5929 
    5930 > volume #12 level 0.2671
    5931 
    5932 > volume #12 level 0.1568
    5933 
    5934 > hide #!12 models
    5935 
    5936 > show #!13 models
    5937 
    5938 > volume #13 level 0.2452
    5939 
    5940 > hide #!13 models
    5941 
    5942 > show #!14 models
    5943 
    5944 > hide #!14 models
    5945 
    5946 > show #!15 models
    5947 
    5948 > volume #15 level 0.2291
    5949 
    5950 > volume #15 level 0.3044
    5951 
    5952 > show #!16 models
    5953 
    5954 > hide #!15 models
    5955 
    5956 > volume #16 level 0.2569
    5957 
    5958 > show #!17 models
    5959 
    5960 > hide #!16 models
    5961 
    5962 > volume #17 level 0.2623
    5963 
    5964 > hide #!17 models
    5965 
    5966 > show #!18 models
    5967 
    5968 > volume #18 level 0.2388
    5969 
    5970 > show #!19 models
    5971 
    5972 > hide #!18 models
    5973 
    5974 > volume #19 level 0.2141
    5975 
    5976 > show #!20 models
    5977 
    5978 > hide #!19 models
    5979 
    5980 > volume #20 level 0.2126
    5981 
    5982 > show #!21 models
    5983 
    5984 > hide #!20 models
    5985 
    5986 > show #!22 models
    5987 
    5988 > hide #!21 models
    5989 
    5990 > volume #22 level 0.2133
    5991 
    5992 > close #10-22
    5993 
    5994 > open
    5995 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_39_00013_volume.mrc
    5996 
    5997 Opened J272_class_39_00013_volume.mrc as #10, grid size 144,144,144, pixel
    5998 1.9, shown at level 0.116, step 1, values float32 
    5999 
    6000 > open
    6001 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_38_00013_volume.mrc
    6002 
    6003 Opened J272_class_38_00013_volume.mrc as #11, grid size 144,144,144, pixel
    6004 1.9, shown at level 0.111, step 1, values float32 
    6005 
    6006 > open
    6007 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_37_00013_volume.mrc
    6008 
    6009 Opened J272_class_37_00013_volume.mrc as #12, grid size 144,144,144, pixel
    6010 1.9, shown at level 0.106, step 1, values float32 
    6011 
    6012 > open
    6013 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_36_00013_volume.mrc
    6014 
    6015 Opened J272_class_36_00013_volume.mrc as #13, grid size 144,144,144, pixel
    6016 1.9, shown at level 0.108, step 1, values float32 
    6017 
    6018 > open
    6019 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_35_00013_volume.mrc
    6020 
    6021 Opened J272_class_35_00013_volume.mrc as #14, grid size 144,144,144, pixel
    6022 1.9, shown at level 0.108, step 1, values float32 
    6023 
    6024 > open
    6025 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_34_00013_volume.mrc
    6026 
    6027 Opened J272_class_34_00013_volume.mrc as #15, grid size 144,144,144, pixel
    6028 1.9, shown at level 0.108, step 1, values float32 
    6029 
    6030 > open
    6031 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_33_00013_volume.mrc
    6032 
    6033 Opened J272_class_33_00013_volume.mrc as #16, grid size 144,144,144, pixel
    6034 1.9, shown at level 0.107, step 1, values float32 
    6035 
    6036 > open
    6037 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_32_00013_volume.mrc
    6038 
    6039 Opened J272_class_32_00013_volume.mrc as #17, grid size 144,144,144, pixel
    6040 1.9, shown at level 0.108, step 1, values float32 
    6041 
    6042 > open
    6043 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_31_00013_volume.mrc
    6044 
    6045 Opened J272_class_31_00013_volume.mrc as #18, grid size 144,144,144, pixel
    6046 1.9, shown at level 0.109, step 1, values float32 
    6047 
    6048 > open
    6049 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_30_00013_volume.mrc
    6050 
    6051 Opened J272_class_30_00013_volume.mrc as #19, grid size 144,144,144, pixel
    6052 1.9, shown at level 0.108, step 1, values float32 
    6053 
    6054 > open
    6055 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_29_00013_volume.mrc
    6056 
    6057 Opened J272_class_29_00013_volume.mrc as #20, grid size 144,144,144, pixel
    6058 1.9, shown at level 0.112, step 1, values float32 
    6059 
    6060 > open
    6061 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_28_00013_volume.mrc
    6062 
    6063 Opened J272_class_28_00013_volume.mrc as #21, grid size 144,144,144, pixel
    6064 1.9, shown at level 0.114, step 1, values float32 
    6065 
    6066 > open
    6067 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_27_00013_volume.mrc
    6068 
    6069 Opened J272_class_27_00013_volume.mrc as #22, grid size 144,144,144, pixel
    6070 1.9, shown at level 0.11, step 1, values float32 
    6071 
    6072 > open
    6073 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_26_00013_volume.mrc
    6074 
    6075 Opened J272_class_26_00013_volume.mrc as #23, grid size 144,144,144, pixel
    6076 1.9, shown at level 0.112, step 1, values float32 
    6077 
    6078 > open
    6079 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_25_00013_volume.mrc
    6080 
    6081 Opened J272_class_25_00013_volume.mrc as #24, grid size 144,144,144, pixel
    6082 1.9, shown at level 0.106, step 1, values float32 
    6083 
    6084 > open
    6085 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_24_00013_volume.mrc
    6086 
    6087 Opened J272_class_24_00013_volume.mrc as #25, grid size 144,144,144, pixel
    6088 1.9, shown at level 0.111, step 1, values float32 
    6089 
    6090 > open
    6091 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_23_00013_volume.mrc
    6092 
    6093 Opened J272_class_23_00013_volume.mrc as #26, grid size 144,144,144, pixel
    6094 1.9, shown at level 0.107, step 1, values float32 
    6095 
    6096 > open
    6097 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_22_00013_volume.mrc
    6098 
    6099 Opened J272_class_22_00013_volume.mrc as #27, grid size 144,144,144, pixel
    6100 1.9, shown at level 0.11, step 1, values float32 
    6101 
    6102 > open
    6103 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_21_00013_volume.mrc
    6104 
    6105 Opened J272_class_21_00013_volume.mrc as #28, grid size 144,144,144, pixel
    6106 1.9, shown at level 0.104, step 1, values float32 
    6107 
    6108 > open
    6109 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_20_00013_volume.mrc
    6110 
    6111 Opened J272_class_20_00013_volume.mrc as #29, grid size 144,144,144, pixel
    6112 1.9, shown at level 0.113, step 1, values float32 
    6113 
    6114 > open
    6115 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_19_00013_volume.mrc
    6116 
    6117 Opened J272_class_19_00013_volume.mrc as #30, grid size 144,144,144, pixel
    6118 1.9, shown at level 0.112, step 1, values float32 
    6119 
    6120 > open
    6121 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_18_00013_volume.mrc
    6122 
    6123 Opened J272_class_18_00013_volume.mrc as #31, grid size 144,144,144, pixel
    6124 1.9, shown at level 0.121, step 1, values float32 
    6125 
    6126 > open
    6127 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_17_00013_volume.mrc
    6128 
    6129 Opened J272_class_17_00013_volume.mrc as #32, grid size 144,144,144, pixel
    6130 1.9, shown at level 0.108, step 1, values float32 
    6131 
    6132 > open
    6133 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_16_00013_volume.mrc
    6134 
    6135 Opened J272_class_16_00013_volume.mrc as #33, grid size 144,144,144, pixel
    6136 1.9, shown at level 0.109, step 1, values float32 
    6137 
    6138 > open
    6139 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_15_00013_volume.mrc
    6140 
    6141 Opened J272_class_15_00013_volume.mrc as #34, grid size 144,144,144, pixel
    6142 1.9, shown at level 0.11, step 1, values float32 
    6143 
    6144 > open
    6145 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_14_00013_volume.mrc
    6146 
    6147 Opened J272_class_14_00013_volume.mrc as #35, grid size 144,144,144, pixel
    6148 1.9, shown at level 0.108, step 1, values float32 
    6149 
    6150 > open
    6151 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_13_00013_volume.mrc
    6152 
    6153 Opened J272_class_13_00013_volume.mrc as #36, grid size 144,144,144, pixel
    6154 1.9, shown at level 0.112, step 1, values float32 
    6155 
    6156 > open
    6157 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_12_00013_volume.mrc
    6158 
    6159 Opened J272_class_12_00013_volume.mrc as #37, grid size 144,144,144, pixel
    6160 1.9, shown at level 0.108, step 1, values float32 
    6161 
    6162 > open
    6163 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_11_00013_volume.mrc
    6164 
    6165 Opened J272_class_11_00013_volume.mrc as #38, grid size 144,144,144, pixel
    6166 1.9, shown at level 0.107, step 1, values float32 
    6167 
    6168 > open
    6169 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_10_00013_volume.mrc
    6170 
    6171 Opened J272_class_10_00013_volume.mrc as #39, grid size 144,144,144, pixel
    6172 1.9, shown at level 0.112, step 1, values float32 
    6173 
    6174 > open
    6175 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_09_00013_volume.mrc
    6176 
    6177 Opened J272_class_09_00013_volume.mrc as #40, grid size 144,144,144, pixel
    6178 1.9, shown at level 0.109, step 1, values float32 
    6179 
    6180 > open
    6181 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_08_00013_volume.mrc
    6182 
    6183 Opened J272_class_08_00013_volume.mrc as #41, grid size 144,144,144, pixel
    6184 1.9, shown at level 0.111, step 1, values float32 
    6185 
    6186 > open
    6187 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_07_00013_volume.mrc
    6188 
    6189 Opened J272_class_07_00013_volume.mrc as #42, grid size 144,144,144, pixel
    6190 1.9, shown at level 0.109, step 1, values float32 
    6191 
    6192 > open
    6193 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_06_00013_volume.mrc
    6194 
    6195 Opened J272_class_06_00013_volume.mrc as #43, grid size 144,144,144, pixel
    6196 1.9, shown at level 0.11, step 1, values float32 
    6197 
    6198 > open
    6199 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_05_00013_volume.mrc
    6200 
    6201 Opened J272_class_05_00013_volume.mrc as #44, grid size 144,144,144, pixel
    6202 1.9, shown at level 0.114, step 1, values float32 
    6203 
    6204 > open
    6205 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_04_00013_volume.mrc
    6206 
    6207 Opened J272_class_04_00013_volume.mrc as #45, grid size 144,144,144, pixel
    6208 1.9, shown at level 0.102, step 1, values float32 
    6209 
    6210 > open
    6211 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_03_00013_volume.mrc
    6212 
    6213 Opened J272_class_03_00013_volume.mrc as #46, grid size 144,144,144, pixel
    6214 1.9, shown at level 0.107, step 1, values float32 
    6215 
    6216 > open
    6217 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_02_00013_volume.mrc
    6218 
    6219 Opened J272_class_02_00013_volume.mrc as #47, grid size 144,144,144, pixel
    6220 1.9, shown at level 0.114, step 1, values float32 
    6221 
    6222 > open
    6223 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_01_00013_volume.mrc
    6224 
    6225 Opened J272_class_01_00013_volume.mrc as #48, grid size 144,144,144, pixel
    6226 1.9, shown at level 0.108, step 1, values float32 
    6227 
    6228 > open
    6229 > /Users/victor/Downloads/cryosparc_P89_J272_00013_volume_series(1)/J272_class_00_00013_volume.mrc
    6230 
    6231 Opened J272_class_00_00013_volume.mrc as #49, grid size 144,144,144, pixel
    6232 1.9, shown at level 0.104, step 1, values float32 
    6233 
    6234 > surface dust #10 size 19
    6235 
    6236 > surface dust #11 size 19
    6237 
    6238 > surface dust #12 size 19
    6239 
    6240 > surface dust #13 size 19
    6241 
    6242 > surface dust #14 size 19
    6243 
    6244 > surface dust #15 size 19
    6245 
    6246 > surface dust #16 size 19
    6247 
    6248 > surface dust #17 size 19
    6249 
    6250 > surface dust #18 size 19
    6251 
    6252 > surface dust #19 size 19
    6253 
    6254 > surface dust #20 size 19
    6255 
    6256 > surface dust #21 size 19
    6257 
    6258 > surface dust #22 size 19
    6259 
    6260 > surface dust #23 size 19
    6261 
    6262 > surface dust #24 size 19
    6263 
    6264 > surface dust #25 size 19
    6265 
    6266 > surface dust #26 size 19
    6267 
    6268 > surface dust #27 size 19
    6269 
    6270 > surface dust #28 size 19
    6271 
    6272 > surface dust #29 size 19
    6273 
    6274 > surface dust #30 size 19
    6275 
    6276 > surface dust #31 size 19
    6277 
    6278 > surface dust #32 size 19
    6279 
    6280 > surface dust #33 size 19
    6281 
    6282 > surface dust #34 size 19
    6283 
    6284 > surface dust #35 size 19
    6285 
    6286 > surface dust #36 size 19
    6287 
    6288 > surface dust #37 size 19
    6289 
    6290 > surface dust #38 size 19
    6291 
    6292 > surface dust #39 size 19
    6293 
    6294 > surface dust #40 size 19
    6295 
    6296 > surface dust #41 size 19
    6297 
    6298 > surface dust #42 size 19
    6299 
    6300 > surface dust #43 size 19
    6301 
    6302 > surface dust #44 size 19
    6303 
    6304 > surface dust #45 size 19
    6305 
    6306 > surface dust #46 size 19
    6307 
    6308 > surface dust #47 size 19
    6309 
    6310 > surface dust #48 size 19
    6311 
    6312 > surface dust #49 size 19
    6313 
    6314 > hide #!11 models
    6315 
    6316 > hide #!12 models
    6317 
    6318 > hide #!13 models
    6319 
    6320 > hide #!14 models
    6321 
    6322 > hide #!15 models
    6323 
    6324 > hide #!16 models
    6325 
    6326 > hide #!17 models
    6327 
    6328 > hide #!18 models
    6329 
    6330 > hide #!19 models
    6331 
    6332 > hide #!20 models
    6333 
    6334 > hide #!21 models
    6335 
    6336 > hide #!22 models
    6337 
    6338 > hide #!23 models
    6339 
    6340 > hide #!24 models
    6341 
    6342 > hide #!25 models
    6343 
    6344 > hide #!26 models
    6345 
    6346 > hide #!27 models
    6347 
    6348 > hide #!28 models
    6349 
    6350 > hide #!29 models
    6351 
    6352 > hide #!30 models
    6353 
    6354 > hide #!31 models
    6355 
    6356 > hide #!32 models
    6357 
    6358 > hide #!33 models
    6359 
    6360 > hide #!34 models
    6361 
    6362 > hide #!36 models
    6363 
    6364 > hide #!35 models
    6365 
    6366 > show #!36 models
    6367 
    6368 > hide #!37 models
    6369 
    6370 > hide #!36 models
    6371 
    6372 > hide #!38 models
    6373 
    6374 > hide #!39 models
    6375 
    6376 > hide #!40 models
    6377 
    6378 > hide #!41 models
    6379 
    6380 > hide #!42 models
    6381 
    6382 > hide #!43 models
    6383 
    6384 > hide #!44 models
    6385 
    6386 > hide #!45 models
    6387 
    6388 > hide #!46 models
    6389 
    6390 > hide #!47 models
    6391 
    6392 > hide #!48 models
    6393 
    6394 > hide #!49 models
    6395 
    6396 > volume #10 level 0.2419
    6397 
    6398 > show #!11 models
    6399 
    6400 > hide #!10 models
    6401 
    6402 > volume #11 level 0.2373
    6403 
    6404 > volume #11 level 0.2766
    6405 
    6406 > volume #11 level 0.2478
    6407 
    6408 > show #!10 models
    6409 
    6410 > hide #!11 models
    6411 
    6412 > hide #!10 models
    6413 
    6414 > show #!11 models
    6415 
    6416 > show #!12 models
    6417 
    6418 > hide #!11 models
    6419 
    6420 > volume #12 level 0.2566
    6421 
    6422 > show #!13 models
    6423 
    6424 > hide #!12 models
    6425 
    6426 > volume #13 level 0.2672
    6427 
    6428 > volume #13 level 0.1958
    6429 
    6430 > hide #!13 models
    6431 
    6432 > show #!14 models
    6433 
    6434 > volume #14 level 0.2492
    6435 
    6436 > volume #15 level 0.2397
    6437 
    6438 > volume #16 level 0.2933
    6439 
    6440 > show #!17 models
    6441 
    6442 > hide #!16 models
    6443 
    6444 > volume #17 level 0.2584
    6445 
    6446 > volume #18 level 0.2471
    6447 
    6448 > volume #19 level 0.2161
    6449 
    6450 > volume #19 level 0.1808
    6451 
    6452 > volume #20 level 0.2764
    6453 
    6454 > volume #21 level 0.2626
    6455 
    6456 > volume #22 level 0.2543
    6457 
    6458 > close #10-49
    6459 
    6460 > open
    6461 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_39_00036_volume.mrc
    6462 
    6463 Opened J271_class_39_00036_volume.mrc as #10, grid size 96,96,96, pixel 2.84,
    6464 shown at level 0.0685, step 1, values float32 
    6465 
    6466 > open
    6467 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_38_00036_volume.mrc
    6468 
    6469 Opened J271_class_38_00036_volume.mrc as #11, grid size 96,96,96, pixel 2.84,
    6470 shown at level 0.0681, step 1, values float32 
    6471 
    6472 > open
    6473 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_37_00036_volume.mrc
    6474 
    6475 Opened J271_class_37_00036_volume.mrc as #12, grid size 96,96,96, pixel 2.84,
    6476 shown at level 0.0684, step 1, values float32 
    6477 
    6478 > open
    6479 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_36_00036_volume.mrc
    6480 
    6481 Opened J271_class_36_00036_volume.mrc as #13, grid size 96,96,96, pixel 2.84,
    6482 shown at level 0.0684, step 1, values float32 
    6483 
    6484 > open
    6485 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_35_00036_volume.mrc
    6486 
    6487 Opened J271_class_35_00036_volume.mrc as #14, grid size 96,96,96, pixel 2.84,
    6488 shown at level 0.0673, step 1, values float32 
    6489 
    6490 > open
    6491 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_34_00036_volume.mrc
    6492 
    6493 Opened J271_class_34_00036_volume.mrc as #15, grid size 96,96,96, pixel 2.84,
    6494 shown at level 0.0673, step 1, values float32 
    6495 
    6496 > open
    6497 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_33_00036_volume.mrc
    6498 
    6499 Opened J271_class_33_00036_volume.mrc as #16, grid size 96,96,96, pixel 2.84,
    6500 shown at level 0.0689, step 1, values float32 
    6501 
    6502 > open
    6503 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_32_00036_volume.mrc
    6504 
    6505 Opened J271_class_32_00036_volume.mrc as #17, grid size 96,96,96, pixel 2.84,
    6506 shown at level 0.0676, step 1, values float32 
    6507 
    6508 > open
    6509 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_31_00036_volume.mrc
    6510 
    6511 Opened J271_class_31_00036_volume.mrc as #18, grid size 96,96,96, pixel 2.84,
    6512 shown at level 0.0674, step 1, values float32 
    6513 
    6514 > open
    6515 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_30_00036_volume.mrc
    6516 
    6517 Opened J271_class_30_00036_volume.mrc as #19, grid size 96,96,96, pixel 2.84,
    6518 shown at level 0.0665, step 1, values float32 
    6519 
    6520 > open
    6521 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_29_00036_volume.mrc
    6522 
    6523 Opened J271_class_29_00036_volume.mrc as #20, grid size 96,96,96, pixel 2.84,
    6524 shown at level 0.0677, step 1, values float32 
    6525 
    6526 > open
    6527 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_28_00036_volume.mrc
    6528 
    6529 Opened J271_class_28_00036_volume.mrc as #21, grid size 96,96,96, pixel 2.84,
    6530 shown at level 0.0682, step 1, values float32 
    6531 
    6532 > open
    6533 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_27_00036_volume.mrc
    6534 
    6535 Opened J271_class_27_00036_volume.mrc as #22, grid size 96,96,96, pixel 2.84,
    6536 shown at level 0.0655, step 1, values float32 
    6537 
    6538 > open
    6539 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_26_00036_volume.mrc
    6540 
    6541 Opened J271_class_26_00036_volume.mrc as #23, grid size 96,96,96, pixel 2.84,
    6542 shown at level 0.0692, step 1, values float32 
    6543 
    6544 > open
    6545 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_25_00036_volume.mrc
    6546 
    6547 Opened J271_class_25_00036_volume.mrc as #24, grid size 96,96,96, pixel 2.84,
    6548 shown at level 0.0671, step 1, values float32 
    6549 
    6550 > open
    6551 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_24_00036_volume.mrc
    6552 
    6553 Opened J271_class_24_00036_volume.mrc as #25, grid size 96,96,96, pixel 2.84,
    6554 shown at level 0.0698, step 1, values float32 
    6555 
    6556 > open
    6557 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_23_00036_volume.mrc
    6558 
    6559 Opened J271_class_23_00036_volume.mrc as #26, grid size 96,96,96, pixel 2.84,
    6560 shown at level 0.0673, step 1, values float32 
    6561 
    6562 > open
    6563 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_22_00036_volume.mrc
    6564 
    6565 Opened J271_class_22_00036_volume.mrc as #27, grid size 96,96,96, pixel 2.84,
    6566 shown at level 0.0689, step 1, values float32 
    6567 
    6568 > open
    6569 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_21_00036_volume.mrc
    6570 
    6571 Opened J271_class_21_00036_volume.mrc as #28, grid size 96,96,96, pixel 2.84,
    6572 shown at level 0.068, step 1, values float32 
    6573 
    6574 > open
    6575 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_20_00036_volume.mrc
    6576 
    6577 Opened J271_class_20_00036_volume.mrc as #29, grid size 96,96,96, pixel 2.84,
    6578 shown at level 0.0664, step 1, values float32 
    6579 
    6580 > open
    6581 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_19_00036_volume.mrc
    6582 
    6583 Opened J271_class_19_00036_volume.mrc as #30, grid size 96,96,96, pixel 2.84,
    6584 shown at level 0.0676, step 1, values float32 
    6585 
    6586 > open
    6587 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_18_00036_volume.mrc
    6588 
    6589 Opened J271_class_18_00036_volume.mrc as #31, grid size 96,96,96, pixel 2.84,
    6590 shown at level 0.0698, step 1, values float32 
    6591 
    6592 > open
    6593 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_17_00036_volume.mrc
    6594 
    6595 Opened J271_class_17_00036_volume.mrc as #32, grid size 96,96,96, pixel 2.84,
    6596 shown at level 0.0651, step 1, values float32 
    6597 
    6598 > open
    6599 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_16_00036_volume.mrc
    6600 
    6601 Opened J271_class_16_00036_volume.mrc as #33, grid size 96,96,96, pixel 2.84,
    6602 shown at level 0.068, step 1, values float32 
    6603 
    6604 > open
    6605 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_15_00036_volume.mrc
    6606 
    6607 Opened J271_class_15_00036_volume.mrc as #34, grid size 96,96,96, pixel 2.84,
    6608 shown at level 0.0757, step 1, values float32 
    6609 
    6610 > open
    6611 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_14_00036_volume.mrc
    6612 
    6613 Opened J271_class_14_00036_volume.mrc as #35, grid size 96,96,96, pixel 2.84,
    6614 shown at level 0.0673, step 1, values float32 
    6615 
    6616 > open
    6617 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_13_00036_volume.mrc
    6618 
    6619 Opened J271_class_13_00036_volume.mrc as #36, grid size 96,96,96, pixel 2.84,
    6620 shown at level 0.0685, step 1, values float32 
    6621 
    6622 > open
    6623 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_12_00036_volume.mrc
    6624 
    6625 Opened J271_class_12_00036_volume.mrc as #37, grid size 96,96,96, pixel 2.84,
    6626 shown at level 0.0665, step 1, values float32 
    6627 
    6628 > open
    6629 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_11_00036_volume.mrc
    6630 
    6631 Opened J271_class_11_00036_volume.mrc as #38, grid size 96,96,96, pixel 2.84,
    6632 shown at level 0.0692, step 1, values float32 
    6633 
    6634 > open
    6635 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_10_00036_volume.mrc
    6636 
    6637 Opened J271_class_10_00036_volume.mrc as #39, grid size 96,96,96, pixel 2.84,
    6638 shown at level 0.0673, step 1, values float32 
    6639 
    6640 > open
    6641 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_09_00036_volume.mrc
    6642 
    6643 Opened J271_class_09_00036_volume.mrc as #40, grid size 96,96,96, pixel 2.84,
    6644 shown at level 0.0679, step 1, values float32 
    6645 
    6646 > open
    6647 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_08_00036_volume.mrc
    6648 
    6649 Opened J271_class_08_00036_volume.mrc as #41, grid size 96,96,96, pixel 2.84,
    6650 shown at level 0.0663, step 1, values float32 
    6651 
    6652 > open
    6653 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_07_00036_volume.mrc
    6654 
    6655 Opened J271_class_07_00036_volume.mrc as #42, grid size 96,96,96, pixel 2.84,
    6656 shown at level 0.0649, step 1, values float32 
    6657 
    6658 > open
    6659 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_06_00036_volume.mrc
    6660 
    6661 Opened J271_class_06_00036_volume.mrc as #43, grid size 96,96,96, pixel 2.84,
    6662 shown at level 0.0704, step 1, values float32 
    6663 
    6664 > open
    6665 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_05_00036_volume.mrc
    6666 
    6667 Opened J271_class_05_00036_volume.mrc as #44, grid size 96,96,96, pixel 2.84,
    6668 shown at level 0.0671, step 1, values float32 
    6669 
    6670 > open
    6671 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_04_00036_volume.mrc
    6672 
    6673 Opened J271_class_04_00036_volume.mrc as #45, grid size 96,96,96, pixel 2.84,
    6674 shown at level 0.0698, step 1, values float32 
    6675 
    6676 > open
    6677 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_03_00036_volume.mrc
    6678 
    6679 Opened J271_class_03_00036_volume.mrc as #46, grid size 96,96,96, pixel 2.84,
    6680 shown at level 0.0681, step 1, values float32 
    6681 
    6682 > open
    6683 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_02_00036_volume.mrc
    6684 
    6685 Opened J271_class_02_00036_volume.mrc as #47, grid size 96,96,96, pixel 2.84,
    6686 shown at level 0.0682, step 1, values float32 
    6687 
    6688 > open
    6689 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_01_00036_volume.mrc
    6690 
    6691 Opened J271_class_01_00036_volume.mrc as #48, grid size 96,96,96, pixel 2.84,
    6692 shown at level 0.0687, step 1, values float32 
    6693 
    6694 > open
    6695 > /Users/victor/Downloads/cryosparc_P89_J271_00036_volume_series/J271_class_00_00036_volume.mrc
    6696 
    6697 Opened J271_class_00_00036_volume.mrc as #49, grid size 96,96,96, pixel 2.84,
    6698 shown at level 0.0667, step 1, values float32 
    6699 
    6700 > surface dust #10 size 28.4
    6701 
    6702 > surface dust #11 size 28.4
    6703 
    6704 > surface dust #12 size 28.4
    6705 
    6706 > surface dust #13 size 28.4
    6707 
    6708 > surface dust #14 size 28.4
    6709 
    6710 > surface dust #15 size 28.4
    6711 
    6712 > surface dust #16 size 28.4
    6713 
    6714 > surface dust #17 size 28.4
    6715 
    6716 > surface dust #18 size 28.4
    6717 
    6718 > surface dust #19 size 28.4
    6719 
    6720 > surface dust #20 size 28.4
    6721 
    6722 > surface dust #21 size 28.4
    6723 
    6724 > surface dust #22 size 28.4
    6725 
    6726 > surface dust #23 size 28.4
    6727 
    6728 > surface dust #24 size 28.4
    6729 
    6730 > surface dust #25 size 28.4
    6731 
    6732 > surface dust #26 size 28.4
    6733 
    6734 > surface dust #27 size 28.4
    6735 
    6736 > surface dust #28 size 28.4
    6737 
    6738 > surface dust #29 size 28.4
    6739 
    6740 > surface dust #30 size 28.4
    6741 
    6742 > surface dust #31 size 28.4
    6743 
    6744 > surface dust #32 size 28.4
    6745 
    6746 > surface dust #33 size 28.4
    6747 
    6748 > surface dust #34 size 28.4
    6749 
    6750 > surface dust #35 size 28.4
    6751 
    6752 > surface dust #36 size 28.4
    6753 
    6754 > surface dust #37 size 28.4
    6755 
    6756 > surface dust #38 size 28.4
    6757 
    6758 > surface dust #39 size 28.4
    6759 
    6760 > surface dust #40 size 28.4
    6761 
    6762 > surface dust #41 size 28.4
    6763 
    6764 > surface dust #42 size 28.4
    6765 
    6766 > surface dust #43 size 28.4
    6767 
    6768 > surface dust #44 size 28.4
    6769 
    6770 > surface dust #45 size 28.4
    6771 
    6772 > surface dust #46 size 28.4
    6773 
    6774 > surface dust #47 size 28.4
    6775 
    6776 > surface dust #48 size 28.4
    6777 
    6778 > surface dust #49 size 28.4
    6779 
    6780 > surface dust #10 size 28.4
    6781 
    6782 > surface dust #11 size 28.4
    6783 
    6784 > surface dust #12 size 28.4
    6785 
    6786 > surface dust #13 size 28.4
    6787 
    6788 > surface dust #14 size 28.4
    6789 
    6790 > surface dust #15 size 28.4
    6791 
    6792 > surface dust #16 size 28.4
    6793 
    6794 > surface dust #17 size 28.4
    6795 
    6796 > surface dust #18 size 28.4
    6797 
    6798 > surface dust #19 size 28.4
    6799 
    6800 > surface dust #20 size 28.4
    6801 
    6802 > surface dust #21 size 28.4
    6803 
    6804 > surface dust #22 size 28.4
    6805 
    6806 > surface dust #23 size 28.4
    6807 
    6808 > surface dust #24 size 28.4
    6809 
    6810 > surface dust #25 size 28.4
    6811 
    6812 > surface dust #26 size 28.4
    6813 
    6814 > surface dust #27 size 28.4
    6815 
    6816 > surface dust #28 size 28.4
    6817 
    6818 > surface dust #29 size 28.4
    6819 
    6820 > surface dust #30 size 28.4
    6821 
    6822 > surface dust #31 size 28.4
    6823 
    6824 > surface dust #32 size 28.4
    6825 
    6826 > surface dust #33 size 28.4
    6827 
    6828 > surface dust #34 size 28.4
    6829 
    6830 > surface dust #35 size 28.4
    6831 
    6832 > surface dust #36 size 28.4
    6833 
    6834 > surface dust #37 size 28.4
    6835 
    6836 > surface dust #38 size 28.4
    6837 
    6838 > surface dust #39 size 28.4
    6839 
    6840 > surface dust #40 size 28.4
    6841 
    6842 > surface dust #41 size 28.4
    6843 
    6844 > surface dust #42 size 28.4
    6845 
    6846 > surface dust #43 size 28.4
    6847 
    6848 > surface dust #44 size 28.4
    6849 
    6850 > surface dust #45 size 28.4
    6851 
    6852 > surface dust #46 size 28.4
    6853 
    6854 > surface dust #47 size 28.4
    6855 
    6856 > surface dust #48 size 28.4
    6857 
    6858 > surface dust #49 size 28.4
    6859 
    6860 > hide #!10 models
    6861 
    6862 > show #!10 models
    6863 
    6864 > hide #!11 models
    6865 
    6866 > hide #!12 models
    6867 
    6868 > hide #!13 models
    6869 
    6870 > hide #!14 models
    6871 
    6872 > hide #!15 models
    6873 
    6874 > hide #!16 models
    6875 
    6876 > hide #!18 models
    6877 
    6878 > hide #!17 models
    6879 
    6880 > hide #!19 models
    6881 
    6882 > hide #!20 models
    6883 
    6884 > hide #!21 models
    6885 
    6886 > hide #!22 models
    6887 
    6888 > hide #!23 models
    6889 
    6890 > hide #!25 models
    6891 
    6892 > hide #!24 models
    6893 
    6894 > hide #!26 models
    6895 
    6896 > hide #!27 models
    6897 
    6898 > hide #!28 models
    6899 
    6900 > hide #!29 models
    6901 
    6902 > hide #!30 models
    6903 
    6904 > hide #!31 models
    6905 
    6906 > hide #!32 models
    6907 
    6908 > hide #!33 models
    6909 
    6910 > hide #!34 models
    6911 
    6912 > hide #!35 models
    6913 
    6914 > hide #!36 models
    6915 
    6916 > hide #!37 models
    6917 
    6918 > hide #!38 models
    6919 
    6920 > hide #!39 models
    6921 
    6922 > hide #!40 models
    6923 
    6924 > hide #!41 models
    6925 
    6926 > hide #!42 models
    6927 
    6928 > hide #!43 models
    6929 
    6930 > hide #!44 models
    6931 
    6932 > hide #!45 models
    6933 
    6934 > hide #!46 models
    6935 
    6936 > hide #!47 models
    6937 
    6938 > hide #!48 models
    6939 
    6940 > hide #!49 models
    6941 
    6942 > volume #10 level 0.3724
    6943 
    6944 > volume #11 level 0.3369
    6945 
    6946 > volume #12 level 0.3181
    6947 
    6948 > volume #12 level 0.4356
    6949 
    6950 > volume #13 level 0.2616
    6951 
    6952 > volume #13 level 0.203
    6953 
    6954 > volume #14 level 0.2414
    6955 
    6956 > volume #14 level 0.3302
    6957 
    6958 > volume #15 level 0.3233
    6959 
    6960 > volume #16 level 0.3346
    6961 
    6962 > volume #16 level 0.4276
    6963 
    6964 > volume #17 level 0.2243
    6965 
    6966 > volume #17 level 0.3063
    6967 
    6968 > volume #17 level 0.4274
    6969 
    6970 > volume #18 level 0.3529
    6971 
    6972 > volume #18 level 0.06742
    6973 
    6974 > volume #18 level 0.3388
    6975 
    6976 > volume #19 level 0.3562
    6977 
    6978 > volume #20 level 0.3769
    6979 
    6980 > volume #21 level 0.26
    6981 
    6982 > volume #22 level 0.2008
    6983 
    6984 > volume #22 level 0.3211
    6985 
    6986 > volume #23 level 0.3349
    6987 
    6988 > volume #24 level 0.2813
    6989 
    6990 > volume #24 level 0.4518
    6991 
    6992 > volume #25 level 0.3392
    6993 
    6994 > volume #26 level 0.2825
    6995 
    6996 > volume #27 level 0.3441
    6997 
    6998 > volume #28 level 0.3235
    6999 
    7000 > volume #29 level 0.279
    7001 
    7002 > volume #29 level 0.4134
    7003 
    7004 > volume #30 level 0.3102
    7005 
    7006 > volume #31 level 0.2556
    7007 
    7008 > volume #31 level 0.2976
    7009 
    7010 > volume #32 level 0.302
    7011 
    7012 > volume #33 level 0.2865
    7013 
    7014 > volume #35 level 0.3271
    7015 
    7016 > volume #36 level 0.2559
    7017 
    7018 > volume #36 level 0.1935
    7019 
    7020 > volume #36 level 0.2592
    7021 
    7022 > volume #36 level 0.348
    7023 
    7024 > volume #37 level 0.3692
    7025 
    7026 > volume #38 level 0.3288
    7027 
    7028 > volume #39 level 0.3296
    7029 
    7030 > volume #40 level 0.4276
    7031 
    7032 > volume #41 level 0.3688
    7033 
    7034 > volume #42 level 0.2194
    7035 
    7036 > volume #42 level 0.3022
    7037 
    7038 > volume #43 level 0.3053
    7039 
    7040 > volume #44 level 0.2566
    7041 
    7042 > volume #44 level 0.3448
    7043 
    7044 > volume #45 level 0.2954
    7045 
    7046 > volume #45 level 0.3976
    7047 
    7048 > volume #46 level 0.279
    7049 
    7050 > volume #46 level 0.3365
    7051 
    7052 > volume #47 level 0.3087
    7053 
    7054 > volume #47 level 0.375
    7055 
    7056 > volume #48 level 0.3748
    7057 
    7058 > volume #49 level 0.2495
    7059 
    7060 > show #!10 models
    7061 
    7062 > hide #!10 models
    7063 
    7064 > hide #!33 models
    7065 
    7066 > show #!33 models
    7067 
    7068 > hide #!33 models
    7069 
    7070 > show #!10 models
    7071 
    7072 > show #!11 models
    7073 
    7074 > hide #!10 models
    7075 
    7076 > hide #!11 models
    7077 
    7078 > show #!7 models
    7079 
    7080 > show #!9 models
    7081 
    7082 > hide #!7 models
    7083 
    7084 > hide #!9 models
    7085 
    7086 > show #!8 models
    7087 
    7088 > show #!7 models
    7089 
    7090 > hide #!8 models
    7091 
    7092 > show #!2 models
    7093 
    7094 > hide #!7 models
    7095 
    7096 > show #!1 models
    7097 
    7098 > hide #!1 models
    7099 
    7100 > show #!1 models
    7101 
    7102 > hide #!1 models
    7103 
    7104 > show #!1 models
    7105 
    7106 > hide #!1 models
    7107 
    7108 > show #!1 models
    7109 
    7110 > hide #!1 models
    7111 
    7112 > show #!1 models
    7113 
    7114 > hide #!2 models
    7115 
    7116 > show #!2 models
    7117 
    7118 > hide #!2 models
    7119 
    7120 > show #!2 models
    7121 
    7122 > hide #!2 models
    7123 
    7124 > show #!2 models
    7125 
    7126 > hide #!2 models
    7127 
    7128 > show #!2 models
    7129 
    7130 > hide #!2 models
    7131 
    7132 > hide #!1 models
    7133 
    7134 > show #!1 models
    7135 
    7136 > show #!2 models
    7137 
    7138 > hide #!2 models
    7139 
    7140 > show #!3 models
    7141 
    7142 > hide #!3 models
    7143 
    7144 > show #!3 models
    7145 
    7146 > hide #!3 models
    7147 
    7148 > show #!4 models
    7149 
    7150 > hide #!1 models
    7151 
    7152 > show #!3 models
    7153 
    7154 > hide #!3 models
    7155 
    7156 > show #!3 models
    7157 
    7158 > hide #!3 models
    7159 
    7160 > show #!3 models
    7161 
    7162 > hide #!3 models
    7163 
    7164 > show #!3 models
    7165 
    7166 > hide #!3 models
    7167 
    7168 > show #!3 models
    7169 
    7170 > hide #!3 models
    7171 
    7172 > show #!3 models
    7173 
    7174 > hide #!3 models
    7175 
    7176 > show #!3 models
    7177 
    7178 > hide #!3 models
    7179 
    7180 > show #!3 models
    7181 
    7182 > hide #!3 models
    7183 
    7184 > show #!3 models
    7185 
    7186 > hide #!3 models
    7187 
    7188 > hide #!4 models
    7189 
    7190 > show #!4 models
    7191 
    7192 > show #!2 models
    7193 
    7194 > hide #!4 models
    7195 
    7196 > show #!7 models
    7197 
    7198 > show #!8 models
    7199 
    7200 > show #!9 models
    7201 
    7202 > hide #!9 models
    7203 
    7204 > hide #!8 models
    7205 
    7206 > hide #!7 models
    7207 
    7208 > show #!1 models
    7209 
    7210 > show #!3 models
    7211 
    7212 > show #!4 models
    7213 
    7214 > select #1,2,3,4/J,F:170,142, 141, 173
    7215 
    7216 304 atoms, 288 bonds, 32 residues, 4 models selected 
    7217 
    7218 > show sel atoms
    7219 
    7220 > color sel byhetero
    7221 
    7222 > select add #4
    7223 
    7224 5479 atoms, 5572 bonds, 6 pseudobonds, 688 residues, 6 models selected 
    7225 
    7226 > select add #3
    7227 
    7228 10566 atoms, 10768 bonds, 12 pseudobonds, 1331 residues, 8 models selected 
    7229 
    7230 > select add #2
    7231 
    7232 15593 atoms, 15906 bonds, 18 pseudobonds, 1967 residues, 10 models selected 
    7233 
    7234 > select add #1
    7235 
    7236 20637 atoms, 21061 bonds, 24 pseudobonds, 2605 residues, 12 models selected 
    7237 
    7238 > select subtract #4
    7239 
    7240 15386 atoms, 15705 bonds, 18 pseudobonds, 1941 residues, 9 models selected 
    7241 
    7242 > select subtract #3
    7243 
    7244 10223 atoms, 10437 bonds, 12 pseudobonds, 1290 residues, 6 models selected 
    7245 
    7246 > select subtract #2
    7247 
    7248 5120 atoms, 5227 bonds, 6 pseudobonds, 646 residues, 3 models selected 
    7249 
    7250 > select subtract #1
    7251 
    7252 Nothing selected 
    7253 
    7254 > hide #!4 models
    7255 
    7256 > show #!4 models
    7257 
    7258 > hide #!3 models
    7259 
    7260 > hide #!4 models
    7261 
    7262 > hide #!1 models
    7263 
    7264 > show #!1 models
    7265 
    7266 > hide #!1 models
    7267 
    7268 > hide #!2 models
    7269 
    7270 > show #!3 models
    7271 
    7272 > show #!4 models
    7273 
    7274 > hide #!3 models
    7275 
    7276 > show #!1 models
    7277 
    7278 > show #!2 models
    7279 
    7280 > show #!3 models
    7281 
    7282 > hide #!1 models
    7283 
    7284 > hide #!2 models
    7285 
    7286 > hide #!3 models
    7287 
    7288 > hide #!4 models
    7289 
    7290 > show #!9 models
    7291 
    7292 > show #!10 models
    7293 
    7294 > hide #!9 models
    7295 
    7296 > hide #!10 models
    7297 
    7298 > show #!9 models
    7299 
    7300 > show #!8 models
    7301 
    7302 > hide #!9 models
    7303 
    7304 > show #!7 models
    7305 
    7306 > hide #!8 models
    7307 
    7308 > show #!8 models
    7309 
    7310 > show #!9 models
    7311 
    7312 > hide #!7 models
    7313 
    7314 > hide #!8 models
    7315 
    7316 > show #!8 models
    7317 
    7318 > hide #!9 models
    7319 
    7320 > hide #!8 models
    7321 
    7322 > show #!1 models
    7323 
    7324 > show #!2 models
    7325 
    7326 > hide #!1 models
    7327 
    7328 > show #!1 models
    7329 
    7330 > hide #!1 models
    7331 
    7332 > show #!1 models
    7333 
    7334 > hide #!1 models
    7335 
    7336 > hide #!2 models
    7337 
    7338 > show #!1 models
    7339 
    7340 > show #!2 models
    7341 
    7342 > hide #!2 models
    7343 
    7344 > show #!2 models
    7345 
    7346 > hide #!2 models
    7347 
    7348 > show #!2 models
    7349 
    7350 > hide #!1 models
    7351 
    7352 > hide #!2 models
    7353 
    7354 > show #!3 models
    7355 
    7356 > show #!4 models
    7357 
    7358 > hide #!3 models
    7359 
    7360 > hide #!4 models
    7361 
    7362 > show #!5 models
    7363 
    7364 > hide #!5 models
    7365 
    7366 > show #!1 models
    7367 
    7368 > hide #!1 models
    7369 
    7370 > show #!9 models
    7371 
    7372 > show #!5 models
    7373 
    7374 > hide #!9 models
    7375 
    7376 > hide #!5 models
    7377 
    7378 > show #!5 models
    7379 
    7380 > hide #!5 models
    7381 
    7382 > show #!4 models
    7383 
    7384 > show #!5 models
    7385 
    7386 > hide #!5 models
    7387 
    7388 > show #!3 models
    7389 
    7390 > hide #!4 models
    7391 
    7392 > hide #!3 models
    7393 
    7394 > show #!9 models
    7395 
    7396 > show #!10 models
    7397 
    7398 > hide #!9 models
    7399 
    7400 > show #!11 models
    7401 
    7402 > hide #!10 models
    7403 
    7404 > show #!12 models
    7405 
    7406 > hide #!11 models
    7407 
    7408 > show #!13 models
    7409 
    7410 > hide #!12 models
    7411 
    7412 > hide #!13 models
    7413 
    7414 > show #!10 models
    7415 
    7416 > hide #!10 models
    7417 
    7418 > show #!16 models
    7419 
    7420 > volume #16 level 0.3479
    7421 
    7422 > hide #!16 models
    7423 
    7424 > show #!17 models
    7425 
    7426 > hide #!17 models
    7427 
    7428 > show #!18 models
    7429 
    7430 > hide #!18 models
    7431 
    7432 > open
    7433 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_13_00027_volume.mrc
    7434 
    7435 Opened J276_class_13_00027_volume.mrc as #50, grid size 84,84,84, pixel 3.25,
    7436 shown at level 0.0841, step 1, values float32 
    7437 
    7438 > open
    7439 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_12_00027_volume.mrc
    7440 
    7441 Opened J276_class_12_00027_volume.mrc as #51, grid size 84,84,84, pixel 3.25,
    7442 shown at level 0.0738, step 1, values float32 
    7443 
    7444 > open
    7445 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_11_00027_volume.mrc
    7446 
    7447 Opened J276_class_11_00027_volume.mrc as #52, grid size 84,84,84, pixel 3.25,
    7448 shown at level 0.084, step 1, values float32 
    7449 
    7450 > open
    7451 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_10_00027_volume.mrc
    7452 
    7453 Opened J276_class_10_00027_volume.mrc as #53, grid size 84,84,84, pixel 3.25,
    7454 shown at level 0.088, step 1, values float32 
    7455 
    7456 > open
    7457 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_09_00027_volume.mrc
    7458 
    7459 Opened J276_class_09_00027_volume.mrc as #54, grid size 84,84,84, pixel 3.25,
    7460 shown at level 0.0819, step 1, values float32 
    7461 
    7462 > open
    7463 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_08_00027_volume.mrc
    7464 
    7465 Opened J276_class_08_00027_volume.mrc as #55, grid size 84,84,84, pixel 3.25,
    7466 shown at level 0.0799, step 1, values float32 
    7467 
    7468 > open
    7469 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_07_00027_volume.mrc
    7470 
    7471 Opened J276_class_07_00027_volume.mrc as #56, grid size 84,84,84, pixel 3.25,
    7472 shown at level 0.0762, step 1, values float32 
    7473 
    7474 > open
    7475 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_06_00027_volume.mrc
    7476 
    7477 Opened J276_class_06_00027_volume.mrc as #57, grid size 84,84,84, pixel 3.25,
    7478 shown at level 0.0839, step 1, values float32 
    7479 
    7480 > open
    7481 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_05_00027_volume.mrc
    7482 
    7483 Opened J276_class_05_00027_volume.mrc as #58, grid size 84,84,84, pixel 3.25,
    7484 shown at level 0.088, step 1, values float32 
    7485 
    7486 > open
    7487 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_04_00027_volume.mrc
    7488 
    7489 Opened J276_class_04_00027_volume.mrc as #59, grid size 84,84,84, pixel 3.25,
    7490 shown at level 0.0826, step 1, values float32 
    7491 
    7492 > open
    7493 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_03_00027_volume.mrc
    7494 
    7495 Opened J276_class_03_00027_volume.mrc as #60, grid size 84,84,84, pixel 3.25,
    7496 shown at level 0.077, step 1, values float32 
    7497 
    7498 > open
    7499 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_02_00027_volume.mrc
    7500 
    7501 Opened J276_class_02_00027_volume.mrc as #61, grid size 84,84,84, pixel 3.25,
    7502 shown at level 0.0928, step 1, values float32 
    7503 
    7504 > open
    7505 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_01_00027_volume.mrc
    7506 
    7507 Opened J276_class_01_00027_volume.mrc as #62, grid size 84,84,84, pixel 3.25,
    7508 shown at level 0.0915, step 1, values float32 
    7509 
    7510 > open
    7511 > /Users/victor/Downloads/cryosparc_P89_J276_00027_volume_series/J276_class_00_00027_volume.mrc
    7512 
    7513 Opened J276_class_00_00027_volume.mrc as #63, grid size 84,84,84, pixel 3.25,
    7514 shown at level 0.0848, step 1, values float32 
    7515 
    7516 > surface dust #50 size 32.5
    7517 
    7518 > surface dust #51 size 32.5
    7519 
    7520 > surface dust #52 size 32.5
    7521 
    7522 > surface dust #53 size 32.5
    7523 
    7524 > surface dust #54 size 32.5
    7525 
    7526 > surface dust #55 size 32.5
    7527 
    7528 > surface dust #56 size 32.5
    7529 
    7530 > surface dust #57 size 32.5
    7531 
    7532 > surface dust #58 size 32.5
    7533 
    7534 > surface dust #59 size 32.5
    7535 
    7536 > surface dust #60 size 32.5
    7537 
    7538 > surface dust #61 size 32.5
    7539 
    7540 > surface dust #62 size 32.5
    7541 
    7542 > surface dust #63 size 32.5
    7543 
    7544 > hide #!63 models
    7545 
    7546 > hide #!62 models
    7547 
    7548 > hide #!61 models
    7549 
    7550 > hide #!60 models
    7551 
    7552 > hide #!59 models
    7553 
    7554 > hide #!58 models
    7555 
    7556 > hide #!57 models
    7557 
    7558 > hide #!56 models
    7559 
    7560 > hide #!55 models
    7561 
    7562 > hide #!54 models
    7563 
    7564 > hide #!53 models
    7565 
    7566 > hide #!52 models
    7567 
    7568 > hide #!51 models
    7569 
    7570 > volume #50 level 0.3102
    7571 
    7572 > volume #50 level 0.4831
    7573 
    7574 > show #!51 models
    7575 
    7576 > hide #!50 models
    7577 
    7578 > volume #51 level 0.3178
    7579 
    7580 > volume #51 level 0.4635
    7581 
    7582 > volume #52 level 0.3768
    7583 
    7584 > volume #53 level 0.4174
    7585 
    7586 > volume #54 level 0.4417
    7587 
    7588 > volume #55 level 0.5552
    7589 
    7590 > volume #56 level 0.3243
    7591 
    7592 > volume #57 level 0.438
    7593 
    7594 > volume #58 level 0.5053
    7595 
    7596 > volume #59 level 0.4186
    7597 
    7598 > volume #60 level 0.5054
    7599 
    7600 > volume #60 level 0.4084
    7601 
    7602 > volume #61 level 0.3865
    7603 
    7604 > volume #62 level 0.4859
    7605 
    7606 > volume #62 level 0.4258
    7607 
    7608 > volume #63 level 0.4274
    7609 
    7610 > hide #!63 models
    7611 
    7612 > open
    7613 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_00_00024_volume.mrc
    7614 
    7615 Opened J277_class_00_00024_volume.mrc as #64, grid size 60,60,60, pixel 4.55,
    7616 shown at level 0.142, step 1, values float32 
    7617 
    7618 > open
    7619 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_13_00024_volume.mrc
    7620 
    7621 Opened J277_class_13_00024_volume.mrc as #65, grid size 60,60,60, pixel 4.55,
    7622 shown at level 0.139, step 1, values float32 
    7623 
    7624 > open
    7625 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_12_00024_volume.mrc
    7626 
    7627 Opened J277_class_12_00024_volume.mrc as #66, grid size 60,60,60, pixel 4.55,
    7628 shown at level 0.14, step 1, values float32 
    7629 
    7630 > open
    7631 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_11_00024_volume.mrc
    7632 
    7633 Opened J277_class_11_00024_volume.mrc as #67, grid size 60,60,60, pixel 4.55,
    7634 shown at level 0.14, step 1, values float32 
    7635 
    7636 > open
    7637 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_10_00024_volume.mrc
    7638 
    7639 Opened J277_class_10_00024_volume.mrc as #68, grid size 60,60,60, pixel 4.55,
    7640 shown at level 0.131, step 1, values float32 
    7641 
    7642 > open
    7643 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_09_00024_volume.mrc
    7644 
    7645 Opened J277_class_09_00024_volume.mrc as #69, grid size 60,60,60, pixel 4.55,
    7646 shown at level 0.124, step 1, values float32 
    7647 
    7648 > open
    7649 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_08_00024_volume.mrc
    7650 
    7651 Opened J277_class_08_00024_volume.mrc as #70, grid size 60,60,60, pixel 4.55,
    7652 shown at level 0.136, step 1, values float32 
    7653 
    7654 > open
    7655 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_07_00024_volume.mrc
    7656 
    7657 Opened J277_class_07_00024_volume.mrc as #71, grid size 60,60,60, pixel 4.55,
    7658 shown at level 0.147, step 1, values float32 
    7659 
    7660 > open
    7661 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_06_00024_volume.mrc
    7662 
    7663 Opened J277_class_06_00024_volume.mrc as #72, grid size 60,60,60, pixel 4.55,
    7664 shown at level 0.136, step 1, values float32 
    7665 
    7666 > open
    7667 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_05_00024_volume.mrc
    7668 
    7669 Opened J277_class_05_00024_volume.mrc as #73, grid size 60,60,60, pixel 4.55,
    7670 shown at level 0.134, step 1, values float32 
    7671 
    7672 > open
    7673 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_04_00024_volume.mrc
    7674 
    7675 Opened J277_class_04_00024_volume.mrc as #74, grid size 60,60,60, pixel 4.55,
    7676 shown at level 0.137, step 1, values float32 
    7677 
    7678 > open
    7679 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_03_00024_volume.mrc
    7680 
    7681 Opened J277_class_03_00024_volume.mrc as #75, grid size 60,60,60, pixel 4.55,
    7682 shown at level 0.128, step 1, values float32 
    7683 
    7684 > open
    7685 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_02_00024_volume.mrc
    7686 
    7687 Opened J277_class_02_00024_volume.mrc as #76, grid size 60,60,60, pixel 4.55,
    7688 shown at level 0.135, step 1, values float32 
    7689 
    7690 > open
    7691 > /Users/victor/Downloads/cryosparc_P89_J277_00024_volume_series/J277_class_01_00024_volume.mrc
    7692 
    7693 Opened J277_class_01_00024_volume.mrc as #77, grid size 60,60,60, pixel 4.55,
    7694 shown at level 0.13, step 1, values float32 
    7695 
    7696 > volume #64 level 0.6342
    7697 
    7698 > volume #65 level 0.5067
    7699 
    7700 > volume #65 level 0.7461
    7701 
    7702 > volume #66 level 0.6642
    7703 
    7704 > volume #67 level 0.6535
    7705 
    7706 > show #!68 models
    7707 
    7708 > volume #68 level 0.5712
    7709 
    7710 > volume #68 level 0.7512
    7711 
    7712 > volume #69 level 0.6306
    7713 
    7714 > hide #!69 models
    7715 
    7716 > show #!69 models
    7717 
    7718 > hide #!69 models
    7719 
    7720 > show #!70 models
    7721 
    7722 > volume #69 level 0.9138
    7723 
    7724 > volume #70 level 0.5989
    7725 
    7726 > volume #70 level 0.6425
    7727 
    7728 > volume #70 level 0.7778
    7729 
    7730 > volume #71 level 0.6228
    7731 
    7732 > hide #!71 models
    7733 
    7734 > show #!16 models
    7735 
    7736 > show #!49 models
    7737 
    7738 > hide #!16 models
    7739 
    7740 > volume #49 level 0.2805
    7741 
    7742 > close #64-77
    7743 
    7744 > show #!63 models
    7745 
    7746 > hide #!49 models
    7747 
    7748 > show #!62 models
    7749 
    7750 > hide #!63 models
    7751 
    7752 > hide #!62 models
    7753 
    7754 > show #!50 models
    7755 
    7756 > hide #!50 models
    7757 
    7758 > hide #!49 models
    7759 
    7760 > show #!50 models
    7761 
    7762 > volume #50 level 0.2348
    7763 
    7764 > volume #50 level 0.3413
    7765 
    7766 > show #!51 models
    7767 
    7768 > hide #!50 models
    7769 
    7770 > volume #51 level 0.3336
    7771 
    7772 > volume #51 level 0.5107
    7773 
    7774 > hide #!51 models
    7775 
    7776 > show #!50 models
    7777 
    7778 > hide #!50 models
    7779 
    7780 > show #!51 models
    7781 
    7782 > volume #51 level 0.3493
    7783 
    7784 > volume #52 level 0.3203
    7785 
    7786 > volume #52 level 0.3944
    7787 
    7788 > hide #!52 models
    7789 
    7790 > show #!53 models
    7791 
    7792 > volume #53 level 0.4677
    7793 
    7794 > hide #!53 models
    7795 
    7796 > show #!54 models
    7797 
    7798 > show #!55 models
    7799 
    7800 > hide #!54 models
    7801 
    7802 > volume #55 level 0.3945
    7803 
    7804 > show #!56 models
    7805 
    7806 > hide #!55 models
    7807 
    7808 > volume #56 level 0.3747
    7809 
    7810 > hide #!56 models
    7811 
    7812 > show #!57 models
    7813 
    7814 > volume #57 level 0.2703
    7815 
    7816 > volume #57 level 0.4679
    7817 
    7818 > show #!58 models
    7819 
    7820 > hide #!57 models
    7821 
    7822 > volume #58 level 0.4867
    7823 
    7824 > show #!59 models
    7825 
    7826 > hide #!58 models
    7827 
    7828 > show #!60 models
    7829 
    7830 > hide #!59 models
    7831 
    7832 > show #!61 models
    7833 
    7834 > hide #!60 models
    7835 
    7836 > volume #61 level 0.4119
    7837 
    7838 > show #!62 models
    7839 
    7840 > hide #!61 models
    7841 
    7842 > volume #62 level 0.3056
    7843 
    7844 > show #!63 models
    7845 
    7846 > hide #!62 models
    7847 
    7848 > volume #63 level 0.4919
    7849 
    7850 > hide #!63 models
    7851 
    7852 > show #!48 models
    7853 
    7854 > hide #!48 models
    7855 
    7856 > show #!50 models
    7857 
    7858 > hide #!50 models
    7859 
    7860 > show #!50 models
    7861 
    7862 > hide #!50 models
    7863 
    7864 > show #!54 models
    7865 
    7866 > hide #!54 models
    7867 
    7868 > open
    7869 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_09_00439_volume.mrc
    7870 
    7871 Opened J292_class_09_00439_volume.mrc as #64, grid size 120,120,120, pixel
    7872 2.27, shown at level 0.0372, step 1, values float32 
    7873 
    7874 > open
    7875 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_08_00439_volume.mrc
    7876 
    7877 Opened J292_class_08_00439_volume.mrc as #65, grid size 120,120,120, pixel
    7878 2.27, shown at level 0.0304, step 1, values float32 
    7879 
    7880 > open
    7881 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_07_00439_volume.mrc
    7882 
    7883 Opened J292_class_07_00439_volume.mrc as #66, grid size 120,120,120, pixel
    7884 2.27, shown at level 0.0342, step 1, values float32 
    7885 
    7886 > open
    7887 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_06_00439_volume.mrc
    7888 
    7889 Opened J292_class_06_00439_volume.mrc as #67, grid size 120,120,120, pixel
    7890 2.27, shown at level 0.0355, step 1, values float32 
    7891 
    7892 > open
    7893 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_05_00439_volume.mrc
    7894 
    7895 Opened J292_class_05_00439_volume.mrc as #68, grid size 120,120,120, pixel
    7896 2.27, shown at level 0.0237, step 1, values float32 
    7897 
    7898 > open
    7899 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_04_00439_volume.mrc
    7900 
    7901 Opened J292_class_04_00439_volume.mrc as #69, grid size 120,120,120, pixel
    7902 2.27, shown at level 0.0301, step 1, values float32 
    7903 
    7904 > open
    7905 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_03_00439_volume.mrc
    7906 
    7907 Opened J292_class_03_00439_volume.mrc as #70, grid size 120,120,120, pixel
    7908 2.27, shown at level 0.0348, step 1, values float32 
    7909 
    7910 > open
    7911 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_02_00439_volume.mrc
    7912 
    7913 Opened J292_class_02_00439_volume.mrc as #71, grid size 120,120,120, pixel
    7914 2.27, shown at level 0.0389, step 1, values float32 
    7915 
    7916 > open
    7917 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_01_00439_volume.mrc
    7918 
    7919 Opened J292_class_01_00439_volume.mrc as #72, grid size 120,120,120, pixel
    7920 2.27, shown at level 0.0383, step 1, values float32 
    7921 
    7922 > open
    7923 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_00_00439_volume.mrc
    7924 
    7925 Opened J292_class_00_00439_volume.mrc as #73, grid size 120,120,120, pixel
    7926 2.27, shown at level 0.0356, step 1, values float32 
    7927 
    7928 > hide #!65 models
    7929 
    7930 > hide #!66 models
    7931 
    7932 > hide #!67 models
    7933 
    7934 > hide #!68 models
    7935 
    7936 > hide #!69 models
    7937 
    7938 > hide #!70 models
    7939 
    7940 > hide #!71 models
    7941 
    7942 > hide #!72 models
    7943 
    7944 > hide #!73 models
    7945 
    7946 > volume #64 level 0.2249
    7947 
    7948 > surface dust #64 size 22.8
    7949 
    7950 > volume #64 level 0.1052
    7951 
    7952 > volume #64 level 0.1297
    7953 
    7954 > show #!65 models
    7955 
    7956 > hide #!64 models
    7957 
    7958 > volume #65 level 0.07001
    7959 
    7960 > surface dust #65 size 22.8
    7961 
    7962 > volume #65 level 0.1731
    7963 
    7964 > show #!66 models
    7965 
    7966 > hide #!65 models
    7967 
    7968 > volume #66 level 0.1718
    7969 
    7970 > hide #!66 models
    7971 
    7972 > show #!67 models
    7973 
    7974 > volume #67 level 0.1437
    7975 
    7976 > hide #!67 models
    7977 
    7978 > show #!68 models
    7979 
    7980 > surface dust #68 size 22.8
    7981 
    7982 > volume #68 level 0.1141
    7983 
    7984 > volume #68 level 0.1028
    7985 
    7986 > hide #!68 models
    7987 
    7988 > show #!69 models
    7989 
    7990 > volume #69 level 0.1252
    7991 
    7992 > surface dust #69 size 22.8
    7993 
    7994 > hide #!69 models
    7995 
    7996 > show #!70 models
    7997 
    7998 > surface dust #70 size 22.8
    7999 
    8000 > volume #70 level 0.1572
    8001 
    8002 > show #!71 models
    8003 
    8004 > hide #!70 models
    8005 
    8006 > volume #71 level 0.0912
    8007 
    8008 > surface dust #71 size 22.8
    8009 
    8010 > show #!64 models
    8011 
    8012 > hide #!71 models
    8013 
    8014 > show #!65 models
    8015 
    8016 > hide #!64 models
    8017 
    8018 > hide #!65 models
    8019 
    8020 > show #!66 models
    8021 
    8022 > show #!67 models
    8023 
    8024 > hide #!66 models
    8025 
    8026 > show #!68 models
    8027 
    8028 > hide #!67 models
    8029 
    8030 > show #!69 models
    8031 
    8032 > hide #!68 models
    8033 
    8034 > volume #69 level 0.17
    8035 
    8036 > show #!70 models
    8037 
    8038 > hide #!69 models
    8039 
    8040 > show #!71 models
    8041 
    8042 > hide #!70 models
    8043 
    8044 > hide #!71 models
    8045 
    8046 > show #!72 models
    8047 
    8048 > surface dust #72 size 22.8
    8049 
    8050 > volume #72 level 0.1641
    8051 
    8052 > hide #!72 models
    8053 
    8054 > show #!73 models
    8055 
    8056 > volume #73 level 0.09201
    8057 
    8058 > volume #73 level 0.1511
    8059 
    8060 > volume #73 level 0.1752
    8061 
    8062 Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
    8063 got 0 atomic models, 1 maps. 
    8064 
    8065 > surface dust #73 size 22.8
    8066 
    8067 > volume #73 level 0.1001
    8068 
    8069 > hide #!73 models
    8070 
    8071 > open
    8072 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_09_00439_volume.mrc
    8073 
    8074 Opened J293_class_09_00439_volume.mrc as #74, grid size 144,144,144, pixel
    8075 1.9, shown at level 0.0275, step 1, values float32 
    8076 
    8077 > open
    8078 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_08_00439_volume.mrc
    8079 
    8080 Opened J293_class_08_00439_volume.mrc as #75, grid size 144,144,144, pixel
    8081 1.9, shown at level 0.0253, step 1, values float32 
    8082 
    8083 > open
    8084 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_07_00439_volume.mrc
    8085 
    8086 Opened J293_class_07_00439_volume.mrc as #76, grid size 144,144,144, pixel
    8087 1.9, shown at level 0.0224, step 1, values float32 
    8088 
    8089 > open
    8090 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_06_00439_volume.mrc
    8091 
    8092 Opened J293_class_06_00439_volume.mrc as #77, grid size 144,144,144, pixel
    8093 1.9, shown at level 0.0331, step 1, values float32 
    8094 
    8095 > open
    8096 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_05_00439_volume.mrc
    8097 
    8098 Opened J293_class_05_00439_volume.mrc as #78, grid size 144,144,144, pixel
    8099 1.9, shown at level 0.0277, step 1, values float32 
    8100 
    8101 > open
    8102 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_04_00439_volume.mrc
    8103 
    8104 Opened J293_class_04_00439_volume.mrc as #79, grid size 144,144,144, pixel
    8105 1.9, shown at level 0.0276, step 1, values float32 
    8106 
    8107 > open
    8108 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_03_00439_volume.mrc
    8109 
    8110 Opened J293_class_03_00439_volume.mrc as #80, grid size 144,144,144, pixel
    8111 1.9, shown at level 0.0275, step 1, values float32 
    8112 
    8113 > open
    8114 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_02_00439_volume.mrc
    8115 
    8116 Opened J293_class_02_00439_volume.mrc as #81, grid size 144,144,144, pixel
    8117 1.9, shown at level 0.026, step 1, values float32 
    8118 
    8119 > open
    8120 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_01_00439_volume.mrc
    8121 
    8122 Opened J293_class_01_00439_volume.mrc as #82, grid size 144,144,144, pixel
    8123 1.9, shown at level 0.0262, step 1, values float32 
    8124 
    8125 > open
    8126 > /Users/victor/Downloads/cryosparc_P1_J293_00439_volume_series/J293_class_00_00439_volume.mrc
    8127 
    8128 Opened J293_class_00_00439_volume.mrc as #83, grid size 144,144,144, pixel
    8129 1.9, shown at level 0.0272, step 1, values float32 
    8130 
    8131 > hide #!75 models
    8132 
    8133 > hide #!76 models
    8134 
    8135 > show #!75 models
    8136 
    8137 > show #!76 models
    8138 
    8139 > surface dust #74 size 19
    8140 
    8141 > surface dust #75 size 19
    8142 
    8143 > surface dust #76 size 19
    8144 
    8145 > surface dust #77 size 19
    8146 
    8147 > surface dust #78 size 19
    8148 
    8149 > surface dust #79 size 19
    8150 
    8151 > surface dust #80 size 19
    8152 
    8153 > surface dust #81 size 19
    8154 
    8155 > surface dust #82 size 19
    8156 
    8157 > surface dust #83 size 19
    8158 
    8159 > hide #!75 models
    8160 
    8161 > hide #!74 models
    8162 
    8163 > show #!74 models
    8164 
    8165 > hide #!76 models
    8166 
    8167 > hide #!77 models
    8168 
    8169 > hide #!78 models
    8170 
    8171 > hide #!79 models
    8172 
    8173 > hide #!80 models
    8174 
    8175 > hide #!81 models
    8176 
    8177 > hide #!82 models
    8178 
    8179 > hide #!83 models
    8180 
    8181 > volume #74 level 0.1149
    8182 
    8183 > show #!75 models
    8184 
    8185 > hide #!74 models
    8186 
    8187 > volume #75 level 0.1848
    8188 
    8189 > show #!76 models
    8190 
    8191 > hide #!75 models
    8192 
    8193 > volume #76 level 0.158
    8194 
    8195 > show #!77 models
    8196 
    8197 > hide #!76 models
    8198 
    8199 > show #!78 models
    8200 
    8201 > hide #!77 models
    8202 
    8203 > volume #78 level 0.1569
    8204 
    8205 > show #!79 models
    8206 
    8207 > hide #!78 models
    8208 
    8209 > volume #79 level 0.134
    8210 
    8211 > show #!80 models
    8212 
    8213 > hide #!79 models
    8214 
    8215 > volume #80 level 0.1549
    8216 
    8217 > show #!81 models
    8218 
    8219 > hide #!80 models
    8220 
    8221 > volume #81 level 0.1535
    8222 
    8223 > volume #81 level 0.1025
    8224 
    8225 > volume #82 level 0.1599
    8226 
    8227 > volume #82 level 0.1309
    8228 
    8229 > volume #83 level 0.1336
    8230 
    8231 > close #74-83
    8232 
    8233 > open
    8234 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_09_00439_volume.mrc
    8235 
    8236 Opened J292_class_09_00439_volume.mrc as #74, grid size 120,120,120, pixel
    8237 2.27, shown at level 0.0372, step 1, values float32 
    8238 
    8239 > open
    8240 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_08_00439_volume.mrc
    8241 
    8242 Opened J292_class_08_00439_volume.mrc as #75, grid size 120,120,120, pixel
    8243 2.27, shown at level 0.0304, step 1, values float32 
    8244 
    8245 > open
    8246 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_07_00439_volume.mrc
    8247 
    8248 Opened J292_class_07_00439_volume.mrc as #76, grid size 120,120,120, pixel
    8249 2.27, shown at level 0.0342, step 1, values float32 
    8250 
    8251 > open
    8252 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_06_00439_volume.mrc
    8253 
    8254 Opened J292_class_06_00439_volume.mrc as #77, grid size 120,120,120, pixel
    8255 2.27, shown at level 0.0355, step 1, values float32 
    8256 
    8257 > open
    8258 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_05_00439_volume.mrc
    8259 
    8260 Opened J292_class_05_00439_volume.mrc as #78, grid size 120,120,120, pixel
    8261 2.27, shown at level 0.0237, step 1, values float32 
    8262 
    8263 > open
    8264 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_04_00439_volume.mrc
    8265 
    8266 Opened J292_class_04_00439_volume.mrc as #79, grid size 120,120,120, pixel
    8267 2.27, shown at level 0.0301, step 1, values float32 
    8268 
    8269 > open
    8270 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_03_00439_volume.mrc
    8271 
    8272 Opened J292_class_03_00439_volume.mrc as #80, grid size 120,120,120, pixel
    8273 2.27, shown at level 0.0348, step 1, values float32 
    8274 
    8275 > open
    8276 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_02_00439_volume.mrc
    8277 
    8278 Opened J292_class_02_00439_volume.mrc as #81, grid size 120,120,120, pixel
    8279 2.27, shown at level 0.0389, step 1, values float32 
    8280 
    8281 > open
    8282 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_01_00439_volume.mrc
    8283 
    8284 Opened J292_class_01_00439_volume.mrc as #82, grid size 120,120,120, pixel
    8285 2.27, shown at level 0.0383, step 1, values float32 
    8286 
    8287 > open
    8288 > /Users/victor/Downloads/cryosparc_P1_J292_00439_volume_series/J292_class_00_00439_volume.mrc
    8289 
    8290 Opened J292_class_00_00439_volume.mrc as #83, grid size 120,120,120, pixel
    8291 2.27, shown at level 0.0356, step 1, values float32 
    8292 
    8293 > surface dust #74 size 22.8
    8294 
    8295 > surface dust #75 size 22.8
    8296 
    8297 > surface dust #76 size 22.8
    8298 
    8299 > surface dust #77 size 22.8
    8300 
    8301 > surface dust #78 size 22.8
    8302 
    8303 > surface dust #79 size 22.8
    8304 
    8305 > surface dust #80 size 22.8
    8306 
    8307 > surface dust #81 size 22.8
    8308 
    8309 > surface dust #82 size 22.8
    8310 
    8311 > surface dust #83 size 22.8
    8312 
    8313 > hide #!75 models
    8314 
    8315 > hide #!76 models
    8316 
    8317 > hide #!77 models
    8318 
    8319 > hide #!78 models
    8320 
    8321 > hide #!79 models
    8322 
    8323 > hide #!80 models
    8324 
    8325 > hide #!81 models
    8326 
    8327 > hide #!82 models
    8328 
    8329 > show #!80 models
    8330 
    8331 > hide #!80 models
    8332 
    8333 > show #!79 models
    8334 
    8335 > hide #!79 models
    8336 
    8337 > show #!79 models
    8338 
    8339 > hide #!79 models
    8340 
    8341 > hide #!83 models
    8342 
    8343 > volume #74 level 0.09705
    8344 
    8345 > volume #74 level 0.1433
    8346 
    8347 > volume #75 level 0.1229
    8348 
    8349 > volume #75 level 0.144
    8350 
    8351 > volume #76 level 0.1511
    8352 
    8353 > volume #77 level 0.1466
    8354 
    8355 > volume #78 level 0.1396
    8356 
    8357 > volume #79 level 0.1304
    8358 
    8359 > volume #80 level 0.1624
    8360 
    8361 > volume #82 level 0.1748
    8362 
    8363 > volume #83 level 0.186
    8364 
    8365 > hide #!83 models
    8366 
    8367 > show #!64 models
    8368 
    8369 > hide #!64 models
    8370 
    8371 > show #!65 models
    8372 
    8373 > show #!66 models
    8374 
    8375 > show #!67 models
    8376 
    8377 > show #!68 models
    8378 
    8379 > hide #!67 models
    8380 
    8381 > hide #!66 models
    8382 
    8383 > hide #!65 models
    8384 
    8385 > volume #68 level 0.02372
    8386 
    8387 > volume #68 level 0.1481
    8388 
    8389 > show #!78 models
    8390 
    8391 > volume #78 level 0.09719
    8392 
    8393 > close #74-83
    8394 
    8395 > hide #!68 models
    8396 
    8397 > open
    8398 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_09_00439_volume.mrc
    8399 
    8400 Opened J294_class_09_00439_volume.mrc as #74, grid size 120,120,120, pixel
    8401 2.27, shown at level 0.037, step 1, values float32 
    8402 
    8403 > open
    8404 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_08_00439_volume.mrc
    8405 
    8406 Opened J294_class_08_00439_volume.mrc as #75, grid size 120,120,120, pixel
    8407 2.27, shown at level 0.0389, step 1, values float32 
    8408 
    8409 > open
    8410 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_07_00439_volume.mrc
    8411 
    8412 Opened J294_class_07_00439_volume.mrc as #76, grid size 120,120,120, pixel
    8413 2.27, shown at level 0.0353, step 1, values float32 
    8414 
    8415 > open
    8416 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_06_00439_volume.mrc
    8417 
    8418 Opened J294_class_06_00439_volume.mrc as #77, grid size 120,120,120, pixel
    8419 2.27, shown at level 0.0387, step 1, values float32 
    8420 
    8421 > open
    8422 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_05_00439_volume.mrc
    8423 
    8424 Opened J294_class_05_00439_volume.mrc as #78, grid size 120,120,120, pixel
    8425 2.27, shown at level 0.0321, step 1, values float32 
    8426 
    8427 > open
    8428 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_04_00439_volume.mrc
    8429 
    8430 Opened J294_class_04_00439_volume.mrc as #79, grid size 120,120,120, pixel
    8431 2.27, shown at level 0.0375, step 1, values float32 
    8432 
    8433 > open
    8434 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_03_00439_volume.mrc
    8435 
    8436 Opened J294_class_03_00439_volume.mrc as #80, grid size 120,120,120, pixel
    8437 2.27, shown at level 0.0309, step 1, values float32 
    8438 
    8439 > open
    8440 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_02_00439_volume.mrc
    8441 
    8442 Opened J294_class_02_00439_volume.mrc as #81, grid size 120,120,120, pixel
    8443 2.27, shown at level 0.0366, step 1, values float32 
    8444 
    8445 > open
    8446 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_01_00439_volume.mrc
    8447 
    8448 Opened J294_class_01_00439_volume.mrc as #82, grid size 120,120,120, pixel
    8449 2.27, shown at level 0.0301, step 1, values float32 
    8450 
    8451 > open
    8452 > /Users/victor/Downloads/cryosparc_P1_J294_00439_volume_series/J294_class_00_00439_volume.mrc
    8453 
    8454 Opened J294_class_00_00439_volume.mrc as #83, grid size 120,120,120, pixel
    8455 2.27, shown at level 0.0252, step 1, values float32 
    8456 
    8457 > hide #!75 models
    8458 
    8459 > show #!75 models
    8460 
    8461 > surface dust #74 size 22.8
    8462 
    8463 > surface dust #75 size 22.8
    8464 
    8465 > surface dust #76 size 22.8
    8466 
    8467 > surface dust #77 size 22.8
    8468 
    8469 > surface dust #78 size 22.8
    8470 
    8471 > surface dust #79 size 22.8
    8472 
    8473 > surface dust #80 size 22.8
    8474 
    8475 > surface dust #81 size 22.8
    8476 
    8477 > surface dust #82 size 22.8
    8478 
    8479 > surface dust #83 size 22.8
    8480 
    8481 > hide #!75 models
    8482 
    8483 > hide #!76 models
    8484 
    8485 > hide #!77 models
    8486 
    8487 > hide #!78 models
    8488 
    8489 > hide #!79 models
    8490 
    8491 > hide #!80 models
    8492 
    8493 > hide #!81 models
    8494 
    8495 > hide #!82 models
    8496 
    8497 > hide #!83 models
    8498 
    8499 > volume #74 level 0.1073
    8500 
    8501 > volume #74 level 0.1398
    8502 
    8503 > volume #76 level 0.1056
    8504 
    8505 > volume #77 level 0.1322
    8506 
    8507 > volume #78 level 0.1167
    8508 
    8509 > volume #78 level 0.1741
    8510 
    8511 > volume #79 level 0.1546
    8512 
    8513 > volume #80 level 0.1597
    8514 
    8515 > volume #81 level 0.176
    8516 
    8517 > volume #82 level 0.1589
    8518 
    8519 > volume #83 level 0.1703
    8520 
    8521 > show #!83 models
    8522 
    8523 > hide #!83 models
    8524 
    8525 > close #74-83
    8526 
    8527 > show #!64 models
    8528 
    8529 > show #!65 models
    8530 
    8531 > hide #!64 models
    8532 
    8533 > hide #!65 models
    8534 
    8535 > show #!64 models
    8536 
    8537 > show #!65 models
    8538 
    8539 > hide #!64 models
    8540 
    8541 > show #!66 models
    8542 
    8543 > hide #!65 models
    8544 
    8545 > hide #!66 models
    8546 
    8547 > show #!67 models
    8548 
    8549 > show #!68 models
    8550 
    8551 > hide #!67 models
    8552 
    8553 > show #!67 models
    8554 
    8555 > hide #!68 models
    8556 
    8557 > hide #!67 models
    8558 
    8559 > show #!68 models
    8560 
    8561 > show #!69 models
    8562 
    8563 > hide #!68 models
    8564 
    8565 > hide #!69 models
    8566 
    8567 > show #!70 models
    8568 
    8569 > show #!71 models
    8570 
    8571 > hide #!70 models
    8572 
    8573 > show #!72 models
    8574 
    8575 > hide #!71 models
    8576 
    8577 > hide #!72 models
    8578 
    8579 > show #!73 models
    8580 
    8581 > volume #73 level 0.1564
    8582 
    8583 > hide #!73 models
    8584 
    8585 > show #!65 models
    8586 
    8587 > show #!66 models
    8588 
    8589 > show #!68 models
    8590 
    8591 > show #!72 models
    8592 
    8593 > hide #!72 models
    8594 
    8595 > show #!73 models
    8596 
    8597 > hide #!65 models
    8598 
    8599 > hide #!66 models
    8600 
    8601 > hide #!68 models
    8602 
    8603 > hide #!73 models
    8604 
    8605 > show #!64 models
    8606 
    8607 > show #!66 models
    8608 
    8609 > hide #!66 models
    8610 
    8611 > show #!65 models
    8612 
    8613 > hide #!65 models
    8614 
    8615 > show #!67 models
    8616 
    8617 > hide #!67 models
    8618 
    8619 > show #!67 models
    8620 
    8621 > hide #!67 models
    8622 
    8623 > hide #!64 models
    8624 
    8625 > show #!65 models
    8626 
    8627 > hide #!65 models
    8628 
    8629 > show #!66 models
    8630 
    8631 > hide #!66 models
    8632 
    8633 > show #!67 models
    8634 
    8635 > show #!68 models
    8636 
    8637 > hide #!67 models
    8638 
    8639 > hide #!68 models
    8640 
    8641 > show #!69 models
    8642 
    8643 > volume #69 level 0.1199
    8644 
    8645 > hide #!69 models
    8646 
    8647 > show #!70 models
    8648 
    8649 > hide #!70 models
    8650 
    8651 > show #!71 models
    8652 
    8653 > show #!72 models
    8654 
    8655 > hide #!71 models
    8656 
    8657 > show #!73 models
    8658 
    8659 > hide #!72 models
    8660 
    8661 > hide #!73 models
    8662 
    8663 > show #!64 models
    8664 
    8665 > hide #!64 models
    8666 
    8667 > show #!65 models
    8668 
    8669 > hide #!65 models
    8670 
    8671 > show #!65 models
    8672 
    8673 > show #!66 models
    8674 
    8675 > hide #!65 models
    8676 
    8677 > show #!65 models
    8678 
    8679 > show #!67 models
    8680 
    8681 > hide #!67 models
    8682 
    8683 > show #!67 models
    8684 
    8685 > hide #!67 models
    8686 
    8687 > show #!67 models
    8688 
    8689 > hide #!67 models
    8690 
    8691 > show #!67 models
    8692 
    8693 > hide #!67 models
    8694 
    8695 > show #!67 models
    8696 
    8697 > hide #!67 models
    8698 
    8699 > show #!67 models
    8700 
    8701 > show #!68 models
    8702 
    8703 > hide #!68 models
    8704 
    8705 > show #!68 models
    8706 
    8707 > show #!69 models
    8708 
    8709 > hide #!69 models
    8710 
    8711 > show #!69 models
    8712 
    8713 > hide #!69 models
    8714 
    8715 > hide #!68 models
    8716 
    8717 > hide #!67 models
    8718 
    8719 > hide #!66 models
    8720 
    8721 > hide #!65 models
    8722 
    8723 > show #!64 models
    8724 
    8725 > show #!70 models
    8726 
    8727 > show #!72 models
    8728 
    8729 > hide #!70 models
    8730 
    8731 > hide #!72 models
    8732 
    8733 > hide #!64 models
    8734 
    8735 > show #!65 models
    8736 
    8737 > show #!66 models
    8738 
    8739 > show #!67 models
    8740 
    8741 > show #!68 models
    8742 
    8743 > show #!69 models
    8744 
    8745 > show #!70 models
    8746 
    8747 > hide #!70 models
    8748 
    8749 > show #!73 models
    8750 
    8751 > hide #!73 models
    8752 
    8753 > show #!73 models
    8754 
    8755 > show #!70 models
    8756 
    8757 > hide #!70 models
    8758 
    8759 > show #!71 models
    8760 
    8761 > hide #!71 models
    8762 
    8763 > hide #!67 models
    8764 
    8765 > hide #!66 models
    8766 
    8767 > hide #!65 models
    8768 
    8769 > hide #!69 models
    8770 
    8771 > hide #!73 models
    8772 
    8773 > show #!69 models
    8774 
    8775 > hide #!68 models
    8776 
    8777 > hide #!69 models
    8778 
    8779 > show #!73 models
    8780 
    8781 > hide #!73 models
    8782 
    8783 > show #!72 models
    8784 
    8785 > show #!71 models
    8786 
    8787 > hide #!72 models
    8788 
    8789 > hide #!71 models
    8790 
    8791 > show #!70 models
    8792 
    8793 > hide #!70 models
    8794 
    8795 > show #!69 models
    8796 
    8797 > hide #!69 models
    8798 
    8799 > show #!68 models
    8800 
    8801 > hide #!68 models
    8802 
    8803 > show #!67 models
    8804 
    8805 > hide #!67 models
    8806 
    8807 > show #!66 models
    8808 
    8809 > hide #!66 models
    8810 
    8811 > show #!65 models
    8812 
    8813 > hide #!65 models
    8814 
    8815 > show #!64 models
    8816 
    8817 > show #!65 models
    8818 
    8819 > hide #!64 models
    8820 
    8821 > show #!66 models
    8822 
    8823 > hide #!65 models
    8824 
    8825 > show #!67 models
    8826 
    8827 > hide #!66 models
    8828 
    8829 > hide #!67 models
    8830 
    8831 > show #!69 models
    8832 
    8833 > hide #!69 models
    8834 
    8835 > show #!69 models
    8836 
    8837 > hide #!69 models
    8838 
    8839 > show #!70 models
    8840 
    8841 > hide #!70 models
    8842 
    8843 > show #!71 models
    8844 
    8845 > hide #!71 models
    8846 
    8847 > show #!72 models
    8848 
    8849 > hide #!72 models
    8850 
    8851 > show #!73 models
    8852 
    8853 > hide #!73 models
    8854 
    8855 > show #!62 models
    8856 
    8857 > show #!63 models
    8858 
    8859 > hide #!62 models
    8860 
    8861 > hide #!63 models
    8862 
    8863 > show #!64 models
    8864 
    8865 > show #!65 models
    8866 
    8867 > hide #!64 models
    8868 
    8869 > hide #!65 models
    8870 
    8871 > show #!66 models
    8872 
    8873 > hide #!66 models
    8874 
    8875 > show #!64 models
    8876 
    8877 > hide #!64 models
    8878 
    8879 > show #!64 models
    8880 
    8881 > show #!63 models
    8882 
    8883 > hide #!64 models
    8884 
    8885 > hide #!63 models
    8886 
    8887 > show #!65 models
    8888 
    8889 > hide #!65 models
    8890 
    8891 > show #!70 models
    8892 
    8893 > hide #!70 models
    8894 
    8895 > show #!72 models
    8896 
    8897 > open /Users/victor/Downloads/cryosparc_P89_J280_010_volume_map.mrc
    8898 
    8899 Opened cryosparc_P89_J280_010_volume_map.mrc as #74, grid size 360,360,360,
    8900 pixel 0.758, shown at level 0.0135, step 2, values float32 
    8901 
    8902 > surface dust #72 size 22.8
    8903 
    8904 > surface dust #74 size 7.58
    8905 
    8906 > hide #!72 models
    8907 
    8908 > volume #74 step 1
    8909 
    8910 > volume #74 level 0.02799
    8911 
    8912 > surface dust #74 size 7.58
    8913 
    8914 > volume #74 level 0.0723
    8915 
    8916 > volume #74 level 0.03651
    8917 
    8918 > volume #74 level 0.05014
    8919 
    8920 > volume #74 level 0.07827
    8921 
    8922 > open /Users/victor/Downloads/cryosparc_P89_J283_013_volume_map.mrc
    8923 
    8924 Opened cryosparc_P89_J283_013_volume_map.mrc as #75, grid size 360,360,360,
    8925 pixel 0.758, shown at level 0.0148, step 2, values float32 
    8926 
    8927 > open /Users/victor/Downloads/cryosparc_P89_J284_009_volume_map.mrc
    8928 
    8929 Opened cryosparc_P89_J284_009_volume_map.mrc as #76, grid size 360,360,360,
    8930 pixel 0.758, shown at level 0.0124, step 2, values float32 
    8931 
    8932 > hide #!74 models
    8933 
    8934 > surface dust #75 size 7.58
    8935 
    8936 > surface dust #76 size 7.58
    8937 
    8938 > volume #75 step 1
    8939 
    8940 > volume #76 step 1
    8941 
    8942 > volume #75 level 0.0246
    8943 
    8944 > volume #75 level 0.04953
    8945 
    8946 > volume #75 level 0.06766
    8947 
    8948 > volume #76 level 0.06966
    8949 
    8950 > volume #76 level 0.04735
    8951 
    8952 > volume #76 level 0.06384
    8953 
    8954 > volume #76 level 0.0522
    8955 
    8956 > volume #76 level 0.0716
    8957 
    8958 > close #74-76
    8959 
    8960 > show #!73 models
    8961 
    8962 > show #!65 models
    8963 
    8964 > show #!66 models
    8965 
    8966 > show #!67 models
    8967 
    8968 > show #!68 models
    8969 
    8970 > show #!69 models
    8971 
    8972 > show #!70 models
    8973 
    8974 > show #!71 models
    8975 
    8976 > show #!72 models
    8977 
    8978 > show #!64 models
    8979 
    8980 > close #10-73
    8981 
    8982 > show #!7 models
    8983 
    8984 > show #!8 models
    8985 
    8986 > show #!9 models
    8987 
    8988 > hide #!7 models
    8989 
    8990 > hide #!8 models
    8991 
    8992 > show #!2 models
    8993 
    8994 > hide #!9 models
    8995 
    8996 > show #!8 models
    8997 
    8998 > hide #!2 models
    8999 
    9000 > hide #!8 models
    9001 
    9002 > show #!1 models
    9003 
    9004 > show #!2 models
    9005 
    9006 > hide #!2 models
    9007 
    9008 > hide #!1 models
    9009 
    9010 > show #!2 models
    9011 
    9012 > show #!1 models
    9013 
    9014 > hide #!1 models
    9015 
    9016 > show #!1 models
    9017 
    9018 > hide #!2 models
    9019 
    9020 > show #!2 models
    9021 
    9022 > hide #!2 models
    9023 
    9024 > show #!2 models
    9025 
    9026 > hide #!2 models
    9027 
    9028 > show #!2 models
    9029 
    9030 > hide #!2 models
    9031 
    9032 > show #!2 models
    9033 
    9034 > hide #!2 models
    9035 
    9036 > show #!2 models
    9037 
    9038 > hide #!2 models
    9039 
    9040 > show #!2 models
    9041 
    9042 > hide #!2 models
    9043 
    9044 > show #!2 models
    9045 
    9046 > hide #!2 models
    9047 
    9048 > show #!2 models
    9049 
    9050 > hide #!2 models
    9051 
    9052 > hide #!1 models
    9053 
    9054 > show #!1 models
    9055 
    9056 > show #!2 models
    9057 
    9058 > hide #!1 models
    9059 
    9060 > hide #!2 models
    9061 
    9062 > show #!3 models
    9063 
    9064 > show #!4 models
    9065 
    9066 > hide #!4 models
    9067 
    9068 > show #!4 models
    9069 
    9070 > hide #!4 models
    9071 
    9072 > show #!4 models
    9073 
    9074 > hide #!4 models
    9075 
    9076 > show #!4 models
    9077 
    9078 > hide #!4 models
    9079 
    9080 > show #!4 models
    9081 
    9082 > hide #!4 models
    9083 
    9084 > show #!4 models
    9085 
    9086 > hide #!4 models
    9087 
    9088 > show #!4 models
    9089 
    9090 > hide #!4 models
    9091 
    9092 > show #!4 models
    9093 
    9094 > show #!2 models
    9095 
    9096 > show #!1 models
    9097 
    9098 > hide #!1 models
    9099 
    9100 > hide #!2 models
    9101 
    9102 > show #!2 models
    9103 
    9104 > hide #!3 models
    9105 
    9106 > hide #!4 models
    9107 
    9108 > show #!1 models
    9109 
    9110 > hide #!1 models
    9111 
    9112 > hide #!2 models
    9113 
    9114 > show #!3 models
    9115 
    9116 > show #!4 models
    9117 
    9118 > hide #!4 models
    9119 
    9120 > hide #!3 models
    9121 
    9122 > show #!3 models
    9123 
    9124 > show #!4 models
    9125 
    9126 > show #!2 models
    9127 
    9128 > show #!1 models
    9129 
    9130 > hide #!3 models
    9131 
    9132 > hide #!2 models
    9133 
    9134 > hide #!4 models
    9135 
    9136 > show #!2 models
    9137 
    9138 > hide #!2 models
    9139 
    9140 > hide #!1 models
    9141 
    9142 > show #!9 models
    9143 
    9144 > hide #!9 models
    9145 
    9146 > show #!1 models
    9147 
    9148 > show #!2 models
    9149 
    9150 > hide #!2 models
    9151 
    9152 > show #!2 models
    9153 
    9154 > hide #!1 models
    9155 
    9156 > show #!1 models
    9157 
    9158 > hide #!2 models
    9159 
    9160 > show #!2 models
    9161 
    9162 > hide #!2 models
    9163 
    9164 > show #!2 models
    9165 
    9166 > hide #!2 models
    9167 
    9168 > show #!2 models
    9169 
    9170 > hide #!2 models
    9171 
    9172 > hide #!1 models
    9173 
    9174 > show #!9 models
    9175 
    9176 > hide #!9 models
    9177 
    9178 > show #!9 models
    9179 
    9180 > hide #!9 models
    9181 
    9182 > show #!4 models
    9183 
    9184 > hide #!4 models
    9185 
    9186 > show #!9 models
    9187 
    9188 > hide #!9 models
    9189 
    9190 > show #!7 models
    9191 
    9192 > hide #!7 models
    9193 
    9194 > show #!9 models
    9195 
    9196 > show #!8 models
    9197 
    9198 > hide #!9 models
    9199 
    9200 > show #!7 models
    9201 
    9202 > hide #!8 models
    9203 
    9204 > hide #!7 models
    9205 
    9206 > show #!9 models
    9207 
    9208 > show #!8 models
    9209 
    9210 > hide #!9 models
    9211 
    9212 > show #!9 models
    9213 
    9214 > hide #!8 models
    9215 
    9216 > open /Users/victor/Downloads/cryosparc_P89_J278_011_volume_map.mrc
    9217 
    9218 Opened cryosparc_P89_J278_011_volume_map.mrc as #10, grid size 360,360,360,
    9219 pixel 0.758, shown at level 0.00526, step 2, values float32 
    9220 
    9221 > open /Users/victor/Downloads/cryosparc_P89_J286_012_volume_map.mrc
    9222 
    9223 Opened cryosparc_P89_J286_012_volume_map.mrc as #11, grid size 360,360,360,
    9224 pixel 0.758, shown at level 0.00519, step 2, values float32 
    9225 
    9226 > open /Users/victor/Downloads/cryosparc_P89_J281_012_volume_map.mrc
    9227 
    9228 Opened cryosparc_P89_J281_012_volume_map.mrc as #12, grid size 360,360,360,
    9229 pixel 0.758, shown at level 0.00526, step 2, values float32 
    9230 
    9231 > hide #!9 models
    9232 
    9233 > surface dust #10 size 7.58
    9234 
    9235 > surface dust #11 size 7.58
    9236 
    9237 > surface dust #12 size 7.58
    9238 
    9239 > volume #10 step 1
    9240 
    9241 > volume #11 step 1
    9242 
    9243 > volume #12 step 1
    9244 
    9245 > volume #10 level 0.02925
    9246 
    9247 > volume #10 level 0.05105
    9248 
    9249 > hide #!10 models
    9250 
    9251 > show #!11 models
    9252 
    9253 > volume #11 level 0.0525
    9254 
    9255 > volume #11 level 0.02832
    9256 
    9257 > volume #11 level 0.08614
    9258 
    9259 > volume #12 level 0.05287
    9260 
    9261 > volume #12 level 0.07343
    9262 
    9263 > volume #12 level 0.1124
    9264 
    9265 > volume #12 level 0.03448
    9266 
    9267 > volume #11 level 0.01885
    9268 
    9269 > volume #11 level 0.06617
    9270 
    9271 > hide #!11 models
    9272 
    9273 > close #10-12
    9274 
    9275 > show #!7 models
    9276 
    9277 > open /Users/victor/Downloads/cryosparc_P1_J300_012_volume_map.mrc
    9278 
    9279 Opened cryosparc_P1_J300_012_volume_map.mrc as #10, grid size 360,360,360,
    9280 pixel 0.758, shown at level 0.00689, step 2, values float32 
    9281 
    9282 > hide #!7 models
    9283 
    9284 > volume #10 step 1
    9285 
    9286 > surface dust #10 size 7.58
    9287 
    9288 > volume #10 level 0.03027
    9289 
    9290 > open
    9291 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_08_00182_volume.mrc
    9292 
    9293 Opened J298_class_08_00182_volume.mrc as #11, grid size 64,64,64, pixel 3.66,
    9294 shown at level 0.121, step 1, values float32 
    9295 
    9296 > open
    9297 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_07_00182_volume.mrc
    9298 
    9299 Opened J298_class_07_00182_volume.mrc as #12, grid size 64,64,64, pixel 3.66,
    9300 shown at level 0.114, step 1, values float32 
    9301 
    9302 > open
    9303 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_06_00182_volume.mrc
    9304 
    9305 Opened J298_class_06_00182_volume.mrc as #13, grid size 64,64,64, pixel 3.66,
    9306 shown at level 0.138, step 1, values float32 
    9307 
    9308 > open
    9309 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_05_00182_volume.mrc
    9310 
    9311 Opened J298_class_05_00182_volume.mrc as #14, grid size 64,64,64, pixel 3.66,
    9312 shown at level 0.114, step 1, values float32 
    9313 
    9314 > open
    9315 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_04_00182_volume.mrc
    9316 
    9317 Opened J298_class_04_00182_volume.mrc as #15, grid size 64,64,64, pixel 3.66,
    9318 shown at level 0.117, step 1, values float32 
    9319 
    9320 > open
    9321 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_03_00182_volume.mrc
    9322 
    9323 Opened J298_class_03_00182_volume.mrc as #16, grid size 64,64,64, pixel 3.66,
    9324 shown at level 0.12, step 1, values float32 
    9325 
    9326 > open
    9327 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_02_00182_volume.mrc
    9328 
    9329 Opened J298_class_02_00182_volume.mrc as #17, grid size 64,64,64, pixel 3.66,
    9330 shown at level 0.124, step 1, values float32 
    9331 
    9332 > open
    9333 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_01_00182_volume.mrc
    9334 
    9335 Opened J298_class_01_00182_volume.mrc as #18, grid size 64,64,64, pixel 3.66,
    9336 shown at level 0.144, step 1, values float32 
    9337 
    9338 > open
    9339 > /Users/victor/Downloads/cryosparc_P1_J298_00182_volumes/J298_class_00_00182_volume.mrc
    9340 
    9341 Opened J298_class_00_00182_volume.mrc as #19, grid size 64,64,64, pixel 3.66,
    9342 shown at level 0.138, step 1, values float32 
    9343 
    9344 > surface dust #10 size 7.58
    9345 
    9346 > surface dust #11 size 36.6
    9347 
    9348 > surface dust #12 size 36.6
    9349 
    9350 > surface dust #13 size 36.6
    9351 
    9352 > surface dust #14 size 36.6
    9353 
    9354 > surface dust #15 size 36.6
    9355 
    9356 > surface dust #16 size 36.6
    9357 
    9358 > surface dust #17 size 36.6
    9359 
    9360 > surface dust #18 size 36.6
    9361 
    9362 > surface dust #19 size 36.6
    9363 
    9364 > hide #!11 models
    9365 
    9366 > hide #!12 models
    9367 
    9368 > hide #!13 models
    9369 
    9370 > hide #!14 models
    9371 
    9372 > hide #!15 models
    9373 
    9374 > hide #!16 models
    9375 
    9376 > hide #!17 models
    9377 
    9378 > hide #!18 models
    9379 
    9380 > hide #!19 models
    9381 
    9382 > hide #!10 models
    9383 
    9384 > show #!11 models
    9385 
    9386 > close #16
    9387 
    9388 > show #!12 models
    9389 
    9390 > hide #!11 models
    9391 
    9392 > show #!13 models
    9393 
    9394 > hide #!12 models
    9395 
    9396 > show #!14 models
    9397 
    9398 > hide #!13 models
    9399 
    9400 > show #!15 models
    9401 
    9402 > hide #!14 models
    9403 
    9404 > hide #!15 models
    9405 
    9406 > show #!17 models
    9407 
    9408 > hide #!17 models
    9409 
    9410 > show #!18 models
    9411 
    9412 > close #11-15,17
    9413 
    9414 > show #!19 models
    9415 
    9416 > hide #!18 models
    9417 
    9418 > show #!6 models
    9419 
    9420 > hide #!6 models
    9421 
    9422 > hide #!19 models
    9423 
    9424 > show #!18 models
    9425 
    9426 > hide #!18 models
    9427 
    9428 > open
    9429 > /Users/victor/Desktop/GiGet345_FL_Gold/GiG3_AlphHelix45_In_DosArms/HigherResMap_Input/J254_Map232A.mrc
    9430 
    9431 Opened J254_Map232A.mrc as #11, grid size 360,360,360, pixel 0.758, shown at
    9432 level 0.00752, step 2, values float32 
    9433 
    9434 > lighting soft
    9435 
    9436 > volume #11 step 1
    9437 
    9438 > surface dust #11 size 7.58
    9439 
    9440 > volume #11 level 0.02798
    9441 
    9442 > volume #11 level 0.04192
    9443 
    9444 > volume #11 level 0.04657
    9445 
    9446 > show #!6 models
    9447 
    9448 > hide #!6 models
    9449 
    9450 > hide #!11 models
    9451 
    9452 > show #!1 models
    9453 
    9454 > hide #!1 models
    9455 
    9456 > show #!4 models
    9457 
    9458 > hide #!4 models
    9459 
    9460 > show #!5 models
    9461 
    9462 > hide #!5 models
    9463 
    9464 > show #!8 models
    9465 
    9466 > hide #!8 models
    9467 
    9468 > show #!9 models
    9469 
    9470 > hide #!9 models
    9471 
    9472 > open
    9473 > /Users/victor/Desktop/GiGet345_FL_Gold/GiG3_AlphHelix45_In_DosArms/HigherResMap_Input/CootINProgress/J254_GiGet3_IN_TwoGet45_real_space_refined_002-coot-0.pdb
    9474 
    9475 Chain information for
    9476 J254_GiGet3_IN_TwoGet45_real_space_refined_002-coot-0.pdb #12 
    9477 --- 
    9478 Chain | Description 
    9479 C | No description available 
    9480 D | No description available 
    9481 E | No description available 
    9482 F | No description available 
    9483 J | No description available 
    9484  
    9485 
    9486 > hide #!12 models
    9487 
    9488 > show #!4 models
    9489 
    9490 > show #!18 models
    9491 
    9492 > hide #!18 models
    9493 
    9494 > show #!12 models
    9495 
    9496 > close #12
    9497 
    9498 > open
    9499 > /Users/victor/Desktop/GiGet345_FL_Gold/GiG3_AlphHelix4_Up/HigherResMap_Input/CootINProgress/J250_Map_OUT_BothUP_real_space_refined_003-coot-0.pdb
    9500 
    9501 Chain information for J250_Map_OUT_BothUP_real_space_refined_003-coot-0.pdb
    9502 #12 
    9503 --- 
    9504 Chain | Description 
    9505 C | No description available 
    9506 D | No description available 
    9507 E | No description available 
    9508 F | No description available 
    9509 J | No description available 
    9510  
    9511 
    9512 > close #12
    9513 
    9514 > show #!5 models
    9515 
    9516 > show #!6 models
    9517 
    9518 > show #!7 models
    9519 
    9520 > hide #!5 models
    9521 
    9522 > hide #!6 models
    9523 
    9524 > hide #!7 models
    9525 
    9526 > show #!1 models
    9527 
    9528 > show #!2 models
    9529 
    9530 > show #!3 models
    9531 
    9532 > hide #!3 models
    9533 
    9534 > hide #!4 models
    9535 
    9536 > show #!5 models
    9537 
    9538 > hide #!5 models
    9539 
    9540 > hide #!2 models
    9541 
    9542 > show #!2 models
    9543 
    9544 > hide #!2 models
    9545 
    9546 > show #!5 models
    9547 
    9548 > show #!2 models
    9549 
    9550 > hide #!5 models
    9551 
    9552 > hide #!2 models
    9553 
    9554 > show #!2 models
    9555 
    9556 > hide #!1 models
    9557 
    9558 > hide #!2 models
    9559 
    9560 > show #!1 models
    9561 
    9562 > show #!2 models
    9563 
    9564 > hide #!2 models
    9565 
    9566 > hide #!1 models
    9567 
    9568 > show #!1 models
    9569 
    9570 > show #!2 models
    9571 
    9572 > hide #!2 models
    9573 
    9574 > show #!2 models
    9575 
    9576 > hide #!2 models
    9577 
    9578 > show #!2 models
    9579 
    9580 > hide #!2 models
    9581 
    9582 > show #!2 models
    9583 
    9584 > hide #!2 models
    9585 
    9586 > show #!2 models
    9587 
    9588 > hide #!2 models
    9589 
    9590 > show #!2 models
    9591 
    9592 > hide #!2 models
    9593 
    9594 > show #!2 models
    9595 
    9596 > hide #!2 models
    9597 
    9598 > show #!2 models
    9599 
    9600 > show #!3 models
    9601 
    9602 > hide #!3 models
    9603 
    9604 > show #!3 models
    9605 
    9606 > hide #!3 models
    9607 
    9608 > show #!3 models
    9609 
    9610 > hide #!2 models
    9611 
    9612 > hide #!1 models
    9613 
    9614 > show #!4 models
    9615 
    9616 > hide #!3 models
    9617 
    9618 > show #!3 models
    9619 
    9620 > hide #!3 models
    9621 
    9622 > hide #!4 models
    9623 
    9624 > show #!11 models
    9625 
    9626 > hide #!11 models
    9627 
    9628 > show #!18 models
    9629 
    9630 > hide #!18 models
    9631 
    9632 > show #!19 models
    9633 
    9634 > hide #!19 models
    9635 
    9636 > close #19
    9637 
    9638 > close #18
    9639 
    9640 > close #11
    9641 
    9642 > close #10
    9643 
    9644 > show #!9 models
    9645 
    9646 > ui mousemode right "tape measure"
    9647 
    9648 > marker segment #10 position 136.7,141.4,142.6 toPosition 139.3,143.2,141.5
    9649 > color yellow radius 0.1 label 3.333 labelHeight 0.3333 labelColor yellow
    9650 
    9651 > ui mousemode right translate
    9652 
    9653 > ui mousemode right "tape measure"
    9654 
    9655 > marker segment #10 position 135.8,141.6,139.3 toPosition 132.1,143.5,138.2
    9656 > color yellow radius 0.1 label 4.333 labelHeight 0.4333 labelColor yellow
    9657 
    9658 > marker segment #10 position 134.6,141.2,139.1 toPosition 132.1,143.5,138.2
    9659 > color yellow radius 0.1 label 3.495 labelHeight 0.3495 labelColor yellow
    9660 
    9661 > marker segment #10 position 143,150,142.9 toPosition 146.8,151.7,132.1 color
    9662 > yellow radius 0.1 label 11.53 labelHeight 1.153 labelColor yellow
    9663 
    9664 > ui mousemode right "tape measure"
    9665 
    9666 > marker delete #10
    9667 
    9668 > ui mousemode right translate
    9669 
    9670 > ui mousemode right "tape measure"
    9671 
    9672 > marker segment #10 position 134.6,141.2,139.1 toPosition 133.1,141.6,142.4
    9673 > color yellow radius 0.1 label 3.593 labelHeight 0.3593 labelColor yellow
    9674 
    9675 > marker segment #10 position 135.8,141.6,139.3 toPosition 135.8,142.6,141.9
    9676 > color yellow radius 0.1 label 2.854 labelHeight 0.2854 labelColor yellow
    9677 
    9678 > marker delete #10
    9679 
    9680 > marker segment #10 position 132.6,164.5,122.8 toPosition 138.7,179.4,116.3
    9681 > color yellow radius 0.1 label 17.34 labelHeight 1.734 labelColor yellow
    9682 
    9683 > marker delete #10
    9684 
    9685 > ui mousemode right translate
    9686 
    9687 > hide #!9 models
    9688 
    9689 > show #!8 models
    9690 
    9691 > show #!7 models
    9692 
    9693 > hide #!8 models
    9694 
    9695 > hide #!7 models
    9696 
    9697 > show #!9 models
    9698 
    9699 > hide #!9 models
    9700 
    9701 > show #!1 models
    9702 
    9703 > show #!2 models
    9704 
    9705 > show #!3 models
    9706 
    9707 > show #!4 models
    9708 
    9709 > hide #!2 models
    9710 
    9711 > hide #!3 models
    9712 
    9713 > hide #!4 models
    9714 
    9715 > ui mousemode right select
    9716 
    9717 > select add #1/J:401@C1'
    9718 
    9719 1 atom, 1 residue, 1 model selected 
    9720 
    9721 > select up
    9722 
    9723 31 atoms, 33 bonds, 1 residue, 1 model selected 
    9724 
    9725 > select add #1/F:401@O3A
    9726 
    9727 32 atoms, 33 bonds, 2 residues, 1 model selected 
    9728 
    9729 > select up
    9730 
    9731 62 atoms, 66 bonds, 2 residues, 1 model selected 
    9732 
    9733 > color sel byhetero
    9734 
    9735 > select add #1
    9736 
    9737 5120 atoms, 5227 bonds, 6 pseudobonds, 646 residues, 3 models selected 
    9738 
    9739 > select subtract #1
    9740 
    9741 Nothing selected 
    9742 
    9743 > select add #1/J:401@PG
    9744 
    9745 1 atom, 1 residue, 1 model selected 
    9746 
    9747 > select up
    9748 
    9749 31 atoms, 33 bonds, 1 residue, 1 model selected 
    9750 
    9751 > ui tool show Contacts
    9752 
    9753 > contacts sel restrict cross ignoreHiddenModels true
    9754 
    9755 82 contacts 
    9756 
    9757 > select #1/J:23
    9758 
    9759 4 atoms, 3 bonds, 1 residue, 1 model selected 
    9760 
    9761 > select add #1/J:24
    9762 
    9763 8 atoms, 6 bonds, 2 residues, 1 model selected 
    9764 
    9765 > select add #1/J:25
    9766 
    9767 15 atoms, 12 bonds, 3 residues, 1 model selected 
    9768 
    9769 > select add #1/J:28
    9770 
    9771 22 atoms, 18 bonds, 4 residues, 1 model selected 
    9772 
    9773 > select add #1/J:29
    9774 
    9775 29 atoms, 24 bonds, 5 residues, 1 model selected 
    9776 
    9777 > select add #1/J:53
    9778 
    9779 37 atoms, 31 bonds, 6 residues, 1 model selected 
    9780 
    9781 > select subtract #1/J:53
    9782 
    9783 29 atoms, 24 bonds, 5 residues, 1 model selected 
    9784 
    9785 > select add #1/J:57
    9786 
    9787 37 atoms, 31 bonds, 6 residues, 1 model selected 
    9788 
    9789 > show sel atoms
    9790 
    9791 > color sel byhetero
    9792 
    9793 > select add #1/J:53
    9794 
    9795 45 atoms, 38 bonds, 7 residues, 1 model selected 
    9796 
    9797 > show sel atoms
    9798 
    9799 > color sel byhetero
    9800 
    9801 > select clear
    9802 
    9803 > show #!9 models
    9804 
    9805 > hide #10 models
    9806 
    9807 > hide #!9 models
    9808 
    9809 > show #!4 models
    9810 
    9811 > hide #!1 models
    9812 
    9813 Drag select of 7 residues 
    9814 
    9815 > select add #4
    9816 
    9817 5251 atoms, 5356 bonds, 6 pseudobonds, 664 residues, 3 models selected 
    9818 
    9819 > select subtract #4
    9820 
    9821 Nothing selected 
    9822 
    9823 > hide #!4 models
    9824 
    9825 > show #!4 models
    9826 
    9827 > ui mousemode right translate
    9828 
    9829 > show #!5 models
    9830 
    9831 > hide #!4 models
    9832 
    9833 > show #!4 models
    9834 
    9835 > hide #!4 models
    9836 
    9837 > show #!1 models
    9838 
    9839 > show #!2 models
    9840 
    9841 > show #!3 models
    9842 
    9843 > hide #!3 models
    9844 
    9845 > show #!3 models
    9846 
    9847 > show #!4 models
    9848 
    9849 > show #!6 models
    9850 
    9851 > hide #!5 models
    9852 
    9853 > hide #!4 models
    9854 
    9855 > hide #!3 models
    9856 
    9857 > hide #!2 models
    9858 
    9859 > hide #!1 models
    9860 
    9861 > hide #!6 models
    9862 
    9863 > show #!1 models
    9864 
    9865 > show #!2 models
    9866 
    9867 > show #!3 models
    9868 
    9869 > show #!4 models
    9870 
    9871 > hide #!4 models
    9872 
    9873 > hide #!3 models
    9874 
    9875 > hide #!2 models
    9876 
    9877 > hide #!1 models
    9878 
    9879 > show #!9 models
    9880 
    9881 > ui mousemode right select
    9882 
    9883 > select #9/J:169
    9884 
    9885 4 atoms, 3 bonds, 1 residue, 1 model selected 
    9886 
    9887 > show sel atoms
    9888 
    9889 > select add #9
    9890 
    9891 4981 atoms, 5083 bonds, 4 pseudobonds, 633 residues, 2 models selected 
    9892 
    9893 > select subtract #9
    9894 
    9895 Nothing selected 
    9896 
    9897 > hide #!9 models
    9898 
    9899 > show #!1 models
    9900 
    9901 > show #!5 models
    9902 
    9903 > hide #!5 models
    9904 
    9905 > show #!5 models
    9906 
    9907 > hide #!5 models
    9908 
    9909 > show #!5 models
    9910 
    9911 > hide #!5 models
    9912 
    9913 > show #!5 models
    9914 
    9915 > hide #!1 models
    9916 
    9917 > show #!1 models
    9918 
    9919 > hide #!1 models
    9920 
    9921 > show #!1 models
    9922 
    9923 > hide #!1 models
    9924 
    9925 > show #!1 models
    9926 
    9927 > hide #!1 models
    9928 
    9929 > show #!1 models
    9930 
    9931 > hide #!1 models
    9932 
    9933 > show #!1 models
    9934 
    9935 > hide #!1 models
    9936 
    9937 > show #!1 models
    9938 
    9939 > hide #!1 models
    9940 
    9941 > show #!1 models
    9942 
    9943 > show #!2 models
    9944 
    9945 > hide #!2 models
    9946 
    9947 > show #!2 models
    9948 
    9949 > hide #!2 models
    9950 
    9951 > show #!2 models
    9952 
    9953 > hide #!2 models
    9954 
    9955 > show #!2 models
    9956 
    9957 > hide #!2 models
    9958 
    9959 > show #!2 models
    9960 
    9961 > hide #!2 models
    9962 
    9963 > hide #!5 models
    9964 
    9965 > show #!5 models
    9966 
    9967 > hide #!5 models
    9968 
    9969 > show #!5 models
    9970 
    9971 > hide #!5 models
    9972 
    9973 > show #!5 models
    9974 
    9975 > hide #!5 models
    9976 
    9977 > show #!2 models
    9978 
    9979 > show #!3 models
    9980 
    9981 > hide #!1 models
    9982 
    9983 > hide #!2 models
    9984 
    9985 > show #!2 models
    9986 
    9987 > hide #!2 models
    9988 
    9989 > show #!2 models
    9990 
    9991 > hide #!2 models
    9992 
    9993 > show #!2 models
    9994 
    9995 > hide #!2 models
    9996 
    9997 > hide #!3 models
    9998 
    9999 > show #!3 models
    10000 
    10001 > show #!2 models
    10002 
    10003 > hide #!2 models
    10004 
    10005 > show #!2 models
    10006 
    10007 > hide #!2 models
    10008 
    10009 > hide #!3 models
    10010 
    10011 > show #!3 models
    10012 
    10013 > show #!4 models
    10014 
    10015 > hide #!4 models
    10016 
    10017 > show #!4 models
    10018 
    10019 > hide #!4 models
    10020 
    10021 > show #!4 models
    10022 
    10023 > hide #!4 models
    10024 
    10025 > show #!4 models
    10026 
    10027 > hide #!3 models
    10028 
    10029 > show #!3 models
    10030 
    10031 > hide #!3 models
    10032 
    10033 > hide #!4 models
    10034 
    10035 > show #!2 models
    10036 
    10037 > show #!1 models
    10038 
    10039 Drag select of 3 residues 
    10040 
    10041 > select add #2
    10042 
    10043 5123 atoms, 5210 bonds, 6 pseudobonds, 646 residues, 4 models selected 
    10044 
    10045 > select subtract #2
    10046 
    10047 20 atoms, 2 residues, 1 model selected 
    10048 
    10049 > select add #1
    10050 
    10051 5120 atoms, 5227 bonds, 88 pseudobonds, 646 residues, 4 models selected 
    10052 
    10053 > select subtract #1
    10054 
    10055 Nothing selected 
    10056 
    10057 > ui mousemode right translate
    10058 
    10059 > hide #!2 models
    10060 
    10061 > show #!5 models
    10062 
    10063 > hide #!1 models
    10064 
    10065 > ui mousemode right select
    10066 
    10067 > select add #5/A:170
    10068 
    10069 10 atoms, 10 bonds, 1 residue, 1 model selected 
    10070 
    10071 > select add #5/B:170
    10072 
    10073 20 atoms, 20 bonds, 2 residues, 1 model selected 
    10074 
    10075 > show sel atoms
    10076 
    10077 > color sel byhetero
    10078 
    10079 > select add #5
    10080 
    10081 5512 atoms, 5260 bonds, 2 pseudobonds, 1010 residues, 2 models selected 
    10082 
    10083 > select subtract #5
    10084 
    10085 Nothing selected 
    10086 
    10087 > show #!1 models
    10088 
    10089 > show #!2 models
    10090 
    10091 > hide #!1 models
    10092 
    10093 > hide #!5 models
    10094 
    10095 > show #!1 models
    10096 
    10097 > hide #!2 models
    10098 
    10099 > show #!5 models
    10100 
    10101 > show #!2 models
    10102 
    10103 > show #!3 models
    10104 
    10105 > hide #!5 models
    10106 
    10107 > hide #!1 models
    10108 
    10109 > hide #!2 models
    10110 
    10111 > show #!4 models
    10112 
    10113 > show #!5 models
    10114 
    10115 > hide #!4 models
    10116 
    10117 > hide #!3 models
    10118 
    10119 > select up
    10120 
    10121 2 atoms, 1 bond, 1 residue, 1 model selected 
    10122 
    10123 > select up
    10124 
    10125 10 atoms, 10 bonds, 1 residue, 1 model selected 
    10126 
    10127 > select add #5/B:170@CE1
    10128 
    10129 11 atoms, 10 bonds, 2 residues, 1 model selected 
    10130 
    10131 > select up
    10132 
    10133 20 atoms, 20 bonds, 2 residues, 1 model selected 
    10134 
    10135 > ui tool show Contacts
    10136 
    10137 > contacts sel restrict cross ignoreHiddenModels true
    10138 
    10139 24 contacts 
    10140 
    10141 > show #10 models
    10142 
    10143 > select #5/B:171
    10144 
    10145 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10146 
    10147 > show sel atoms
    10148 
    10149 > select add #5/A:167
    10150 
    10151 14 atoms, 13 bonds, 2 residues, 1 model selected 
    10152 
    10153 > show sel atoms
    10154 
    10155 > select backbone
    10156 
    10157 24099 atoms, 24052 bonds, 28 pseudobonds, 5747 residues, 18 models selected 
    10158 
    10159 > select add #9
    10160 
    10161 26548 atoms, 26609 bonds, 28 pseudobonds, 5747 residues, 18 models selected 
    10162 
    10163 > select subtract #9
    10164 
    10165 21567 atoms, 21526 bonds, 24 pseudobonds, 5114 residues, 16 models selected 
    10166 
    10167 > select add #8
    10168 
    10169 24007 atoms, 24074 bonds, 24 pseudobonds, 5114 residues, 16 models selected 
    10170 
    10171 > select subtract #8
    10172 
    10173 19043 atoms, 19008 bonds, 20 pseudobonds, 4483 residues, 14 models selected 
    10174 
    10175 > select add #7
    10176 
    10177 21462 atoms, 21535 bonds, 20 pseudobonds, 4483 residues, 14 models selected 
    10178 
    10179 > select subtract #7
    10180 
    10181 16547 atoms, 16518 bonds, 16 pseudobonds, 3859 residues, 12 models selected 
    10182 
    10183 > select add #6
    10184 
    10185 22076 atoms, 22154 bonds, 24 pseudobonds, 3864 residues, 14 models selected 
    10186 
    10187 > select subtract #6
    10188 
    10189 12916 atoms, 12896 bonds, 10 pseudobonds, 3229 residues, 10 models selected 
    10190 
    10191 > select add #5
    10192 
    10193 15852 atoms, 15584 bonds, 34 pseudobonds, 3595 residues, 11 models selected 
    10194 
    10195 > select subtract #5
    10196 
    10197 10340 atoms, 10324 bonds, 8 pseudobonds, 2585 residues, 8 models selected 
    10198 
    10199 > select add #4
    10200 
    10201 12955 atoms, 13048 bonds, 12 pseudobonds, 2590 residues, 9 models selected 
    10202 
    10203 > select subtract #4
    10204 
    10205 7704 atoms, 7692 bonds, 6 pseudobonds, 1926 residues, 6 models selected 
    10206 
    10207 > select #5 ribbackbone
    10208 
    10209 Expected a keyword 
    10210 
    10211 > open /Users/victor/Downloads/cryosparc_P1_J301_014_volume_map.mrc
    10212 
    10213 Opened cryosparc_P1_J301_014_volume_map.mrc as #11, grid size 360,360,360,
    10214 pixel 0.758, shown at level 0.00724, step 2, values float32 
    10215 
    10216 > volume #11 step 1
    10217 
    10218 > volume #11 level 0.03308
    10219 
    10220 > surface dust #11 size 7.58
    10221 
    10222 Drag select of 11 cryosparc_P1_J301_014_volume_map.mrc 
    10223 
    10224 > ui mousemode right select
    10225 
    10226 > ui mousemode right translate
    10227 
    10228 > hide #!5 models
    10229 
    10230 > select subtract #11
    10231 
    10232 Nothing selected 
    10233 
    10234 > hide #10 models
    10235 
    10236 > volume #11 level 0.02998
    10237 
    10238 > volume #11 level 0.0734
    10239 
    10240 > volume #11 level 0.1292
    10241 
    10242 > volume #11 level 0.08581
    10243 
    10244 > volume #11 level 0.01241
    10245 
    10246 > volume gaussian #11 sDev 2
    10247 
    10248 Opened cryosparc_P1_J301_014_volume_map.mrc gaussian as #12, grid size
    10249 360,360,360, pixel 0.758, shown at step 1, values float32 
    10250 
    10251 > volume #12 level 0.0001564
    10252 
    10253 > volume #12 level 0.001221
    10254 
    10255 > volume #12 color #ffffb280
    10256 
    10257 > show #!11 models
    10258 
    10259 > open /Users/victor/Downloads/cryosparc_P89_J287_volume_map.mrc
    10260 
    10261 Opened cryosparc_P89_J287_volume_map.mrc as #13, grid size 500,500,500, pixel
    10262 0.65, shown at level 0.0074, step 2, values float32 
    10263 
    10264 > hide #!12 models
    10265 
    10266 > hide #!11 models
    10267 
    10268 > surface dust #13 size 6.5
    10269 
    10270 > volume #13 step 1
    10271 
    10272 > volume #13 level 0.02982
    10273 
    10274 > volume #13 level 0.03671
    10275 
    10276 > volume #13 level 0.04706
    10277 
    10278 > open /Users/victor/Downloads/cryosparc_P1_J304_011_volume_mask_refine.mrc
    10279 
    10280 Opened cryosparc_P1_J304_011_volume_mask_refine.mrc as #14, grid size
    10281 360,360,360, pixel 0.758, shown at level 1, step 2, values float32 
    10282 
    10283 > volume #14 step 1
    10284 
    10285 > volume #14 level 1
    10286 
    10287 > hide #!13 models
    10288 
    10289 > open
    10290 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_14_00398_volume.mrc
    10291 
    10292 Opened J307_class_14_00398_volume.mrc as #15, grid size 120,120,120, pixel
    10293 2.27, shown at level 0.0345, step 1, values float32 
    10294 
    10295 > open
    10296 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_13_00398_volume.mrc
    10297 
    10298 Opened J307_class_13_00398_volume.mrc as #16, grid size 120,120,120, pixel
    10299 2.27, shown at level 0.0312, step 1, values float32 
    10300 
    10301 > open
    10302 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_12_00398_volume.mrc
    10303 
    10304 Opened J307_class_12_00398_volume.mrc as #17, grid size 120,120,120, pixel
    10305 2.27, shown at level 0.0367, step 1, values float32 
    10306 
    10307 > open
    10308 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_11_00398_volume.mrc
    10309 
    10310 Opened J307_class_11_00398_volume.mrc as #18, grid size 120,120,120, pixel
    10311 2.27, shown at level 0.0366, step 1, values float32 
    10312 
    10313 > open
    10314 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_10_00398_volume.mrc
    10315 
    10316 Opened J307_class_10_00398_volume.mrc as #19, grid size 120,120,120, pixel
    10317 2.27, shown at level 0.0414, step 1, values float32 
    10318 
    10319 > open
    10320 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_09_00398_volume.mrc
    10321 
    10322 Opened J307_class_09_00398_volume.mrc as #20, grid size 120,120,120, pixel
    10323 2.27, shown at level 0.0362, step 1, values float32 
    10324 
    10325 > open
    10326 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_08_00398_volume.mrc
    10327 
    10328 Opened J307_class_08_00398_volume.mrc as #21, grid size 120,120,120, pixel
    10329 2.27, shown at level 0.0342, step 1, values float32 
    10330 
    10331 > open
    10332 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_07_00398_volume.mrc
    10333 
    10334 Opened J307_class_07_00398_volume.mrc as #22, grid size 120,120,120, pixel
    10335 2.27, shown at level 0.0405, step 1, values float32 
    10336 
    10337 > open
    10338 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_06_00398_volume.mrc
    10339 
    10340 Opened J307_class_06_00398_volume.mrc as #23, grid size 120,120,120, pixel
    10341 2.27, shown at level 0.0355, step 1, values float32 
    10342 
    10343 > open
    10344 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_05_00398_volume.mrc
    10345 
    10346 Opened J307_class_05_00398_volume.mrc as #24, grid size 120,120,120, pixel
    10347 2.27, shown at level 0.0398, step 1, values float32 
    10348 
    10349 > open
    10350 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_04_00398_volume.mrc
    10351 
    10352 Opened J307_class_04_00398_volume.mrc as #25, grid size 120,120,120, pixel
    10353 2.27, shown at level 0.0268, step 1, values float32 
    10354 
    10355 > open
    10356 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_03_00398_volume.mrc
    10357 
    10358 Opened J307_class_03_00398_volume.mrc as #26, grid size 120,120,120, pixel
    10359 2.27, shown at level 0.0428, step 1, values float32 
    10360 
    10361 > open
    10362 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_02_00398_volume.mrc
    10363 
    10364 Opened J307_class_02_00398_volume.mrc as #27, grid size 120,120,120, pixel
    10365 2.27, shown at level 0.0405, step 1, values float32 
    10366 
    10367 > open
    10368 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_01_00398_volume.mrc
    10369 
    10370 Opened J307_class_01_00398_volume.mrc as #28, grid size 120,120,120, pixel
    10371 2.27, shown at level 0.0466, step 1, values float32 
    10372 
    10373 > open
    10374 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_00_00398_volume.mrc
    10375 
    10376 Opened J307_class_00_00398_volume.mrc as #29, grid size 120,120,120, pixel
    10377 2.27, shown at level 0.0369, step 1, values float32 
    10378 
    10379 > surface dust #15 size 22.8
    10380 
    10381 > surface dust #16 size 22.8
    10382 
    10383 > surface dust #17 size 22.8
    10384 
    10385 > surface dust #18 size 22.8
    10386 
    10387 > surface dust #19 size 22.8
    10388 
    10389 > surface dust #20 size 22.8
    10390 
    10391 > surface dust #21 size 22.8
    10392 
    10393 > surface dust #22 size 22.8
    10394 
    10395 > surface dust #23 size 22.8
    10396 
    10397 > surface dust #24 size 22.8
    10398 
    10399 > surface dust #25 size 22.8
    10400 
    10401 > surface dust #26 size 22.8
    10402 
    10403 > surface dust #27 size 22.8
    10404 
    10405 > surface dust #28 size 22.8
    10406 
    10407 > surface dust #29 size 22.8
    10408 
    10409 > hide #!16 models
    10410 
    10411 > hide #!17 models
    10412 
    10413 > hide #!18 models
    10414 
    10415 > hide #!19 models
    10416 
    10417 > hide #!20 models
    10418 
    10419 > hide #!21 models
    10420 
    10421 > hide #!22 models
    10422 
    10423 > hide #!23 models
    10424 
    10425 > hide #!24 models
    10426 
    10427 > hide #!25 models
    10428 
    10429 > hide #!26 models
    10430 
    10431 > hide #!27 models
    10432 
    10433 > hide #!28 models
    10434 
    10435 > show #!27 models
    10436 
    10437 > hide #!27 models
    10438 
    10439 > hide #!29 models
    10440 
    10441 > volume #15 level 0.122
    10442 
    10443 > show #!16 models
    10444 
    10445 > hide #!15 models
    10446 
    10447 > volume #16 level 0.02804
    10448 
    10449 > volume #16 level 0.1433
    10450 
    10451 > volume #16 level 0.08721
    10452 
    10453 > volume #16 level 0.2149
    10454 
    10455 > volume #16 level 0.1246
    10456 
    10457 > volume #17 level 0.1784
    10458 
    10459 > volume #18 level 0.1592
    10460 
    10461 > volume #19 level 0.1254
    10462 
    10463 > volume #19 level 0.1804
    10464 
    10465 > volume #20 level 0.1621
    10466 
    10467 > volume #21 level 0.03418
    10468 
    10469 > volume #21 level 0.1981
    10470 
    10471 > volume #22 level 0.06406
    10472 
    10473 > volume #22 level 0.2172
    10474 
    10475 > volume #22 level 0.1848
    10476 
    10477 > volume #23 level 0.2074
    10478 
    10479 > volume #24 level 0.218
    10480 
    10481 > volume #25 level 0.1098
    10482 
    10483 > volume #26 level 0.2312
    10484 
    10485 > volume #27 level 0.08587
    10486 
    10487 > volume #28 level 0.2113
    10488 
    10489 > volume #29 level 0.1778
    10490 
    10491 > show #!16 models
    10492 
    10493 > show #!15 models
    10494 
    10495 > hide #!16 models
    10496 
    10497 > volume #15 level 0.1803
    10498 
    10499 > show #!16 models
    10500 
    10501 > hide #!15 models
    10502 
    10503 > volume #16 level 0.09966
    10504 
    10505 > volume #16 level 0.1619
    10506 
    10507 > show #!17 models
    10508 
    10509 > hide #!16 models
    10510 
    10511 > volume #17 level 0.1321
    10512 
    10513 > hide #!17 models
    10514 
    10515 > open /Users/victor/Downloads/cryosparc_P1_J305_011_volume_map.mrc
    10516 
    10517 Opened cryosparc_P1_J305_011_volume_map.mrc as #30, grid size 360,360,360,
    10518 pixel 0.758, shown at level 0.0102, step 2, values float32 
    10519 
    10520 > surface dust #30 size 7.58
    10521 
    10522 > volume #30 step 1
    10523 
    10524 > volume #30 level 0.02937
    10525 
    10526 > volume #30 level 0.01167
    10527 
    10528 > volume gaussian #30 sDev 2
    10529 
    10530 Opened cryosparc_P1_J305_011_volume_map.mrc gaussian as #31, grid size
    10531 360,360,360, pixel 0.758, shown at step 1, values float32 
    10532 
    10533 > ui tool show "Segment Map"
    10534 
    10535 Segmenting cryosparc_P1_J305_011_volume_map.mrc gaussian, density threshold
    10536 0.017303 
    10537 Showing 51 region surfaces 
    10538 209 watershed regions, grouped to 51 regions 
    10539 Showing cryosparc_P1_J305_011_volume_map gaussian.seg - 51 regions, 51
    10540 surfaces 
    10541 
    10542 > volume #31 level 0.006497
    10543 
    10544 > close #32
    10545 
    10546 > volume #31 level 0.005665
    10547 
    10548 > volume #31 level 0.006219
    10549 
    10550 Segmenting cryosparc_P1_J305_011_volume_map.mrc gaussian, density threshold
    10551 0.006219 
    10552 Showing 51 region surfaces 
    10553 209 watershed regions, grouped to 51 regions 
    10554 Showing cryosparc_P1_J305_011_volume_map gaussian.seg - 51 regions, 51
    10555 surfaces 
    10556 
    10557 > hide #!31 models
    10558 
    10559 > ui mousemode right select
    10560 
    10561 Drag select of 305, 52413 of 53392 triangles, 322, 315, 20731 of 32060
    10562 triangles, 311, 16478 of 27916 triangles, 306, 301 of 25360 triangles, 186,
    10563 14788 of 16176 triangles 
    10564 Drag select of 316, 318, 309, 31858 of 33672 triangles, 313, 12368 of 27880
    10565 triangles, 301, 3309 of 16892 triangles, 218, 12289 of 18408 triangles, 289,
    10566 7803 of 17168 triangles, 274, 11309 of 15004 triangles 
    10567 
    10568 > select add #32.25
    10569 
    10570 15 models selected 
    10571 
    10572 > select add #32.28
    10573 
    10574 16 models selected 
    10575 
    10576 > select add #32.31
    10577 
    10578 17 models selected 
    10579 
    10580 > select add #32.23
    10581 
    10582 18 models selected 
    10583 
    10584 > select add #32.40
    10585 
    10586 19 models selected 
    10587 
    10588 > select add #32.49
    10589 
    10590 20 models selected 
    10591 
    10592 > select add #32.51
    10593 
    10594 21 models selected 
    10595 
    10596 > select add #32.22
    10597 
    10598 22 models selected 
    10599 
    10600 > select add #32.50
    10601 
    10602 23 models selected 
    10603 
    10604 > select add #32.38
    10605 
    10606 24 models selected 
    10607 
    10608 > select add #32.26
    10609 
    10610 25 models selected 
    10611 
    10612 > select add #32.36
    10613 
    10614 26 models selected 
    10615 
    10616 > select add #32.29
    10617 
    10618 27 models selected 
    10619 
    10620 > select add #32.30
    10621 
    10622 28 models selected 
    10623 Grouped 28 regions 
    10624 
    10625 > select #32.16
    10626 
    10627 1 model selected 
    10628 Ungrouped to 3 regions 
    10629 
    10630 > select #32.11
    10631 
    10632 1 model selected 
    10633 Ungrouped to 4 regions 
    10634 
    10635 > select #32.9
    10636 
    10637 1 model selected 
    10638 Ungrouped to 2 regions 
    10639 
    10640 > select #32.43
    10641 
    10642 1 model selected 
    10643 Ungrouped to 2 regions 
    10644 
    10645 > select #32.47
    10646 
    10647 1 model selected 
    10648 Ungrouped to 2 regions 
    10649 
    10650 > select #32.14
    10651 
    10652 1 model selected 
    10653 
    10654 > select add #32.10
    10655 
    10656 2 models selected 
    10657 Ungrouped to 5 regions 
    10658 
    10659 > select #32.26
    10660 
    10661 1 model selected 
    10662 Ungrouped to 2 regions 
    10663 
    10664 > select #32.25
    10665 
    10666 1 model selected 
    10667 Ungrouped to 2 regions 
    10668 
    10669 > select #32.26
    10670 
    10671 1 model selected 
    10672 Ungrouped to 4 regions 
    10673 
    10674 > select #32.28
    10675 
    10676 1 model selected 
    10677 Ungrouped to 0 regions 
    10678 
    10679 > select #32.4
    10680 
    10681 1 model selected 
    10682 
    10683 > select #32.3
    10684 
    10685 1 model selected 
    10686 
    10687 > select #32.7
    10688 
    10689 1 model selected 
    10690 
    10691 > select add #32.4
    10692 
    10693 2 models selected 
    10694 
    10695 > select add #32.11
    10696 
    10697 3 models selected 
    10698 
    10699 > select add #32.9
    10700 
    10701 4 models selected 
    10702 
    10703 > select add #32.17
    10704 
    10705 5 models selected 
    10706 
    10707 > select add #32.19
    10708 
    10709 6 models selected 
    10710 
    10711 > select #32.17
    10712 
    10713 1 model selected 
    10714 Ungrouped to 0 regions 
    10715 
    10716 > select #32.19
    10717 
    10718 1 model selected 
    10719 
    10720 > select #32.24
    10721 
    10722 1 model selected 
    10723 
    10724 > select add #32.19
    10725 
    10726 2 models selected 
    10727 
    10728 > select add #32.23
    10729 
    10730 3 models selected 
    10731 
    10732 > select add #32.10
    10733 
    10734 4 models selected 
    10735 
    10736 > select add #32.29
    10737 
    10738 5 models selected 
    10739 
    10740 > select add #32.46
    10741 
    10742 6 models selected 
    10743 
    10744 > select add #32.4
    10745 
    10746 7 models selected 
    10747 
    10748 > select add #32.7
    10749 
    10750 8 models selected 
    10751 
    10752 > select add #32.11
    10753 
    10754 9 models selected 
    10755 
    10756 > select add #32.6
    10757 
    10758 10 models selected 
    10759 
    10760 > select add #32.3
    10761 
    10762 11 models selected 
    10763 Grouped 11 regions 
    10764 
    10765 > select #32.28
    10766 
    10767 1 model selected 
    10768 Ungrouped to 0 regions 
    10769 
    10770 > select #32.28
    10771 
    10772 1 model selected 
    10773 Ungrouped to 0 regions 
    10774 
    10775 > show #!31 models
    10776 
    10777 > hide #!31 models
    10778 
    10779 > show #!31 models
    10780 
    10781 > hide #!31 models
    10782 
    10783 > show #!31 models
    10784 
    10785 > hide #!31 models
    10786 
    10787 > show #!30 models
    10788 
    10789 > hide #!30 models
    10790 
    10791 > show #!14 models
    10792 
    10793 > hide #!14 models
    10794 
    10795 > show #!2 models
    10796 
    10797 > select #32.28
    10798 
    10799 1 model selected 
    10800 
    10801 > select #32.33
    10802 
    10803 1 model selected 
    10804 Ungrouped to 2 regions 
    10805 
    10806 > select #32.21
    10807 
    10808 1 model selected 
    10809 
    10810 > hide #!2 models
    10811 
    10812 Ungrouped to 3 regions 
    10813 
    10814 > select #32.11
    10815 
    10816 1 model selected 
    10817 
    10818 > select add #32.6
    10819 
    10820 2 models selected 
    10821 Ungrouped to 2 regions 
    10822 
    10823 > select add #32.11
    10824 
    10825 3 models selected 
    10826 
    10827 > select #32.17
    10828 
    10829 1 model selected 
    10830 Ungrouped to 0 regions 
    10831 
    10832 > select #32.17
    10833 
    10834 1 model selected 
    10835 
    10836 > select #32.9
    10837 
    10838 1 model selected 
    10839 
    10840 > select #32.16
    10841 
    10842 1 model selected 
    10843 Ungrouped to 3 regions 
    10844 
    10845 > select #32.6
    10846 
    10847 1 model selected 
    10848 
    10849 > select #32.25
    10850 
    10851 1 model selected 
    10852 Ungrouped to 0 regions 
    10853 
    10854 > select add #32
    10855 
    10856 37 models selected 
    10857 
    10858 > select subtract #32
    10859 
    10860 Nothing selected 
    10861 Drag select of 320, 296, 321, 281, 247, 266, 317, 248, 212, 211, 300, 85, 230,
    10862 91, 275, 282, 250, 276, 232, 62, 48, 72, 74, 267, 288, 170, 157 
    10863 Grouped 27 regions 
    10864 Saving 1 regions to mrc file... 
    10865 Opened J305_Top.mrc as #33, grid size 92,85,78, pixel 0.758, shown at step 1,
    10866 values float32 
    10867 Wrote J305_Top.mrc 
    10868 
    10869 > select add #32
    10870 
    10871 11 models selected 
    10872 
    10873 > select subtract #32
    10874 
    10875 Nothing selected 
    10876 
    10877 > hide #!32 models
    10878 
    10879 > volume #33 level 0.007123
    10880 
    10881 > color #33 #ffffb281 models
    10882 
    10883 > show #!2 models
    10884 
    10885 > color #33 #ffffb280 models
    10886 
    10887 > hide #!2 models
    10888 
    10889 > show #!1 models
    10890 
    10891 > hide #!1 models
    10892 
    10893 > show #!3 models
    10894 
    10895 > hide #!3 models
    10896 
    10897 > show #!31 models
    10898 
    10899 > hide #!31 models
    10900 
    10901 > show #!30 models
    10902 
    10903 > hide #!30 models
    10904 
    10905 > volume resample #33 onGrid #30
    10906 
    10907 Opened J305_Top.mrc resampled as #34, grid size 360,360,360, pixel 0.758,
    10908 shown at step 1, values float32 
    10909 
    10910 > save /Users/victor/Desktop/J305_Top.mrc models #34
    10911 
    10912 > open /Users/victor/Downloads/cryosparc_P1_J311_mask.mrc
    10913 
    10914 Opened cryosparc_P1_J311_mask.mrc as #35, grid size 360,360,360, pixel 0.758,
    10915 shown at level 0.619, step 2, values float32 
    10916 
    10917 > volume #35 level 0.02276
    10918 
    10919 > show #!2 models
    10920 
    10921 > volume #35 step 1
    10922 
    10923 > volume #35 level 0.9497
    10924 
    10925 > show #!30 models
    10926 
    10927 > volume #35 level 0.3788
    10928 
    10929 > open /Users/victor/Downloads/cryosparc_P1_J311_mask(1).mrc
    10930 
    10931 Opened cryosparc_P1_J311_mask(1).mrc as #36, grid size 360,360,360, pixel
    10932 0.758, shown at level 0.317, step 2, values float32 
    10933 
    10934 > volume #36 step 1
    10935 
    10936 > hide #!30 models
    10937 
    10938 > show #!30 models
    10939 
    10940 > hide #!34 models
    10941 
    10942 > hide #!35 models
    10943 
    10944 > volume #36 color #ffb2ff84
    10945 
    10946 > volume #36 color #ffb2ff85
    10947 
    10948 > volume #36 level 0.008977
    10949 
    10950 > volume #35 level 0.02513
    10951 
    10952 > volume #35 color #b2b2ff7b
    10953 
    10954 > volume #35 color #b2b2ff7a
    10955 
    10956 > volume #36 color #ffb2ff
    10957 
    10958 > volume #35 level 0.003591
    10959 
    10960 > volume #36 level 0.06284
    10961 
    10962 > show #!34 models
    10963 
    10964 > show #!33 models
    10965 
    10966 > hide #!30 models
    10967 
    10968 > hide #!2 models
    10969 
    10970 > close #33-36
    10971 
    10972 > show #!32 models
    10973 
    10974 > show #!31 models
    10975 
    10976 > show #!30 models
    10977 
    10978 > show #!29 models
    10979 
    10980 > show #!28 models
    10981 
    10982 > show #!27 models
    10983 
    10984 > show #!26 models
    10985 
    10986 > hide #!29 models
    10987 
    10988 > hide #!28 models
    10989 
    10990 > hide #!27 models
    10991 
    10992 > hide #!26 models
    10993 
    10994 > close #30-32
    10995 
    10996 > show #!29 models
    10997 
    10998 > show #!28 models
    10999 
    11000 > show #!27 models
    11001 
    11002 > show #!26 models
    11003 
    11004 > show #!25 models
    11005 
    11006 > hide #!25 models
    11007 
    11008 > show #!25 models
    11009 
    11010 > hide #!27 models
    11011 
    11012 > show #!24 models
    11013 
    11014 > show #!23 models
    11015 
    11016 > show #!22 models
    11017 
    11018 > show #!21 models
    11019 
    11020 > show #!20 models
    11021 
    11022 > show #!19 models
    11023 
    11024 > show #!18 models
    11025 
    11026 > show #!17 models
    11027 
    11028 > show #!16 models
    11029 
    11030 > show #!15 models
    11031 
    11032 > close #15-29
    11033 
    11034 > show #!14 models
    11035 
    11036 > show #!13 models
    11037 
    11038 > show #!12 models
    11039 
    11040 > show #!11 models
    11041 
    11042 > close #11-14
    11043 
    11044 > show #10 models
    11045 
    11046 > show #!9 models
    11047 
    11048 > show #!8 models
    11049 
    11050 > hide #!9 models
    11051 
    11052 > hide #10 models
    11053 
    11054 > show #!9 models
    11055 
    11056 > hide #!8 models
    11057 
    11058 > show #!8 models
    11059 
    11060 > hide #!9 models
    11061 
    11062 > hide #!8 models
    11063 
    11064 > show #!7 models
    11065 
    11066 > hide #!7 models
    11067 
    11068 > show #!7 models
    11069 
    11070 > hide #!7 models
    11071 
    11072 > show #!6 models
    11073 
    11074 > hide #!6 models
    11075 
    11076 > show #!5 models
    11077 
    11078 > show #!4 models
    11079 
    11080 > hide #!5 models
    11081 
    11082 > hide #!4 models
    11083 
    11084 > show #!3 models
    11085 
    11086 > show #!2 models
    11087 
    11088 > show #!1 models
    11089 
    11090 > show #!4 models
    11091 
    11092 > hide #!4 models
    11093 
    11094 > show #!4 models
    11095 
    11096 > hide #!4 models
    11097 
    11098 > show #!4 models
    11099 
    11100 > hide #!1 models
    11101 
    11102 > hide #!2 models
    11103 
    11104 > hide #!3 models
    11105 
    11106 > show #!3 models
    11107 
    11108 > select #1,2,3,4/J,F:173
    11109 
    11110 88 atoms, 80 bonds, 8 residues, 4 models selected 
    11111 
    11112 > select add #4
    11113 
    11114 5317 atoms, 5416 bonds, 6 pseudobonds, 670 residues, 6 models selected 
    11115 
    11116 > select add #3
    11117 
    11118 10458 atoms, 10664 bonds, 12 pseudobonds, 1319 residues, 8 models selected 
    11119 
    11120 > select subtract #3
    11121 
    11122 5295 atoms, 5396 bonds, 6 pseudobonds, 668 residues, 5 models selected 
    11123 
    11124 > select add #2
    11125 
    11126 10376 atoms, 10586 bonds, 12 pseudobonds, 1310 residues, 7 models selected 
    11127 
    11128 > select subtract #2
    11129 
    11130 5273 atoms, 5376 bonds, 6 pseudobonds, 666 residues, 4 models selected 
    11131 
    11132 > select add #1
    11133 
    11134 10371 atoms, 10583 bonds, 12 pseudobonds, 1310 residues, 6 models selected 
    11135 
    11136 > select subtract #1
    11137 
    11138 5251 atoms, 5356 bonds, 6 pseudobonds, 664 residues, 3 models selected 
    11139 
    11140 > select subtract #4
    11141 
    11142 Nothing selected 
    11143 
    11144 > select add #4
    11145 
    11146 5251 atoms, 5356 bonds, 6 pseudobonds, 664 residues, 3 models selected 
    11147 
    11148 > select subtract #4
    11149 
    11150 Nothing selected 
    11151 
    11152 > show #!2 models
    11153 
    11154 > show #!1 models
    11155 
    11156 > show #!9 models
    11157 
    11158 > hide #!9 models
    11159 
    11160 > show #!8 models
    11161 
    11162 > hide #!8 models
    11163 
    11164 > show #!9 models
    11165 
    11166 > hide #!9 models
    11167 
    11168 > show #!8 models
    11169 
    11170 > hide #!8 models
    11171 
    11172 > open
    11173 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_14_00375_volume.mrc
    11174 
    11175 Opened J312_class_14_00375_volume.mrc as #11, grid size 120,120,120, pixel
    11176 2.27, shown at level 0.0343, step 1, values float32 
    11177 
    11178 > open
    11179 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_13_00375_volume.mrc
    11180 
    11181 Opened J312_class_13_00375_volume.mrc as #12, grid size 120,120,120, pixel
    11182 2.27, shown at level 0.0381, step 1, values float32 
    11183 
    11184 > open
    11185 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_12_00375_volume.mrc
    11186 
    11187 Opened J312_class_12_00375_volume.mrc as #13, grid size 120,120,120, pixel
    11188 2.27, shown at level 0.0394, step 1, values float32 
    11189 
    11190 > open
    11191 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_11_00375_volume.mrc
    11192 
    11193 Opened J312_class_11_00375_volume.mrc as #14, grid size 120,120,120, pixel
    11194 2.27, shown at level 0.0343, step 1, values float32 
    11195 
    11196 > open
    11197 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_10_00375_volume.mrc
    11198 
    11199 Opened J312_class_10_00375_volume.mrc as #15, grid size 120,120,120, pixel
    11200 2.27, shown at level 0.0379, step 1, values float32 
    11201 
    11202 > open
    11203 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_09_00375_volume.mrc
    11204 
    11205 Opened J312_class_09_00375_volume.mrc as #16, grid size 120,120,120, pixel
    11206 2.27, shown at level 0.0404, step 1, values float32 
    11207 
    11208 > open
    11209 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_08_00375_volume.mrc
    11210 
    11211 Opened J312_class_08_00375_volume.mrc as #17, grid size 120,120,120, pixel
    11212 2.27, shown at level 0.0371, step 1, values float32 
    11213 
    11214 > open
    11215 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_07_00375_volume.mrc
    11216 
    11217 Opened J312_class_07_00375_volume.mrc as #18, grid size 120,120,120, pixel
    11218 2.27, shown at level 0.0358, step 1, values float32 
    11219 
    11220 > open
    11221 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_06_00375_volume.mrc
    11222 
    11223 Opened J312_class_06_00375_volume.mrc as #19, grid size 120,120,120, pixel
    11224 2.27, shown at level 0.038, step 1, values float32 
    11225 
    11226 > open
    11227 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_05_00375_volume.mrc
    11228 
    11229 Opened J312_class_05_00375_volume.mrc as #20, grid size 120,120,120, pixel
    11230 2.27, shown at level 0.0365, step 1, values float32 
    11231 
    11232 > open
    11233 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_04_00375_volume.mrc
    11234 
    11235 Opened J312_class_04_00375_volume.mrc as #21, grid size 120,120,120, pixel
    11236 2.27, shown at level 0.0359, step 1, values float32 
    11237 
    11238 > open
    11239 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_03_00375_volume.mrc
    11240 
    11241 Opened J312_class_03_00375_volume.mrc as #22, grid size 120,120,120, pixel
    11242 2.27, shown at level 0.0361, step 1, values float32 
    11243 
    11244 > open
    11245 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_02_00375_volume.mrc
    11246 
    11247 Opened J312_class_02_00375_volume.mrc as #23, grid size 120,120,120, pixel
    11248 2.27, shown at level 0.0394, step 1, values float32 
    11249 
    11250 > open
    11251 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_01_00375_volume.mrc
    11252 
    11253 Opened J312_class_01_00375_volume.mrc as #24, grid size 120,120,120, pixel
    11254 2.27, shown at level 0.0371, step 1, values float32 
    11255 
    11256 > open
    11257 > /Users/victor/Downloads/cryosparc_P1_J312_00375_volume_series/J312_class_00_00375_volume.mrc
    11258 
    11259 Opened J312_class_00_00375_volume.mrc as #25, grid size 120,120,120, pixel
    11260 2.27, shown at level 0.0418, step 1, values float32 
    11261 
    11262 > hide #!1 models
    11263 
    11264 > hide #!2 models
    11265 
    11266 > hide #!3 models
    11267 
    11268 > hide #!4 models
    11269 
    11270 > surface dust #11 size 22.8
    11271 
    11272 > surface dust #12 size 22.8
    11273 
    11274 > surface dust #13 size 22.8
    11275 
    11276 > surface dust #14 size 22.8
    11277 
    11278 > surface dust #15 size 22.8
    11279 
    11280 > surface dust #16 size 22.8
    11281 
    11282 > surface dust #17 size 22.8
    11283 
    11284 > surface dust #18 size 22.8
    11285 
    11286 > surface dust #19 size 22.8
    11287 
    11288 > surface dust #20 size 22.8
    11289 
    11290 > surface dust #21 size 22.8
    11291 
    11292 > surface dust #22 size 22.8
    11293 
    11294 > surface dust #23 size 22.8
    11295 
    11296 > surface dust #24 size 22.8
    11297 
    11298 > surface dust #25 size 22.8
    11299 
    11300 > hide #!25 models
    11301 
    11302 > hide #!24 models
    11303 
    11304 > hide #!23 models
    11305 
    11306 > hide #!22 models
    11307 
    11308 > hide #!21 models
    11309 
    11310 > hide #!20 models
    11311 
    11312 > hide #!19 models
    11313 
    11314 > hide #!18 models
    11315 
    11316 > hide #!17 models
    11317 
    11318 > hide #!16 models
    11319 
    11320 > hide #!15 models
    11321 
    11322 > hide #!14 models
    11323 
    11324 > hide #!13 models
    11325 
    11326 > hide #!12 models
    11327 
    11328 > volume #11 level 0.1083
    11329 
    11330 > select add #11
    11331 
    11332 2 models selected 
    11333 
    11334 > ui mousemode right "translate selected models"
    11335 
    11336 > view matrix models #11,1,0,0,-10.11,0,1,0,7.8728,0,0,1,70.053
    11337 
    11338 > select subtract #11
    11339 
    11340 Nothing selected 
    11341 
    11342 > show #!12 models
    11343 
    11344 > hide #!11 models
    11345 
    11346 > volume #12 level 0.1638
    11347 
    11348 > show #!13 models
    11349 
    11350 > hide #!12 models
    11351 
    11352 > volume #13 level 0.1535
    11353 
    11354 > volume #13 level 0.2256
    11355 
    11356 > volume #14 level 0.1996
    11357 
    11358 > select add #14
    11359 
    11360 2 models selected 
    11361 
    11362 > show #!11 models
    11363 
    11364 > view matrix models #14,1,0,0,1.5595,0,1,0,4.1176,0,0,1,73.904
    11365 
    11366 > select subtract #14
    11367 
    11368 Nothing selected 
    11369 
    11370 > show #!15 models
    11371 
    11372 > hide #!14 models
    11373 
    11374 > hide #!11 models
    11375 
    11376 > volume #15 level 0.1441
    11377 
    11378 > volume #15 level 0.2214
    11379 
    11380 > volume #16 level 0.2167
    11381 
    11382 > volume #17 level 0.1998
    11383 
    11384 > volume #17 level 0.2642
    11385 
    11386 > volume #18 level 0.207
    11387 
    11388 > hide #!18 models
    11389 
    11390 > show #!19 models
    11391 
    11392 > volume #19 level 0.1823
    11393 
    11394 > volume #19 level 0.2464
    11395 
    11396 > show #!18 models
    11397 
    11398 > hide #!18 models
    11399 
    11400 > hide #!19 models
    11401 
    11402 > show #!20 models
    11403 
    11404 > volume #20 level 0.1368
    11405 
    11406 > volume #20 level 0.1945
    11407 
    11408 > show #!21 models
    11409 
    11410 > hide #!20 models
    11411 
    11412 > volume #21 level 0.2247
    11413 
    11414 > show #!22 models
    11415 
    11416 > hide #!21 models
    11417 
    11418 > volume #22 level 0.2471
    11419 
    11420 > volume #23 level 0.2131
    11421 
    11422 > volume #23 level 0.2542
    11423 
    11424 > volume #24 level 0.1821
    11425 
    11426 > volume #24 level 0.2501
    11427 
    11428 > volume #25 level 0.1821
    11429 
    11430 > hide #!25 models
    11431 
    11432 > show #!24 models
    11433 
    11434 > hide #!24 models
    11435 
    11436 > show #!23 models
    11437 
    11438 > hide #!23 models
    11439 
    11440 > show #!22 models
    11441 
    11442 > hide #!22 models
    11443 
    11444 > show #!21 models
    11445 
    11446 > show #!20 models
    11447 
    11448 > hide #!21 models
    11449 
    11450 > hide #!20 models
    11451 
    11452 > show #!19 models
    11453 
    11454 > hide #!19 models
    11455 
    11456 > show #!18 models
    11457 
    11458 > hide #!18 models
    11459 
    11460 > show #!17 models
    11461 
    11462 > hide #!17 models
    11463 
    11464 > show #!16 models
    11465 
    11466 > hide #!16 models
    11467 
    11468 > show #!15 models
    11469 
    11470 > show #!11 models
    11471 
    11472 > show #!12 models
    11473 
    11474 > show #!13 models
    11475 
    11476 > hide #!12 models
    11477 
    11478 > hide #!11 models
    11479 
    11480 > hide #!13 models
    11481 
    11482 > show #!13 models
    11483 
    11484 > hide #!13 models
    11485 
    11486 > show #!14 models
    11487 
    11488 > hide #!15 models
    11489 
    11490 > open
    11491 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_14_00398_volume.mrc
    11492 
    11493 Opened J307_class_14_00398_volume.mrc as #26, grid size 120,120,120, pixel
    11494 2.27, shown at level 0.0345, step 1, values float32 
    11495 
    11496 > open
    11497 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_13_00398_volume.mrc
    11498 
    11499 Opened J307_class_13_00398_volume.mrc as #27, grid size 120,120,120, pixel
    11500 2.27, shown at level 0.0312, step 1, values float32 
    11501 
    11502 > open
    11503 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_12_00398_volume.mrc
    11504 
    11505 Opened J307_class_12_00398_volume.mrc as #28, grid size 120,120,120, pixel
    11506 2.27, shown at level 0.0367, step 1, values float32 
    11507 
    11508 > open
    11509 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_11_00398_volume.mrc
    11510 
    11511 Opened J307_class_11_00398_volume.mrc as #29, grid size 120,120,120, pixel
    11512 2.27, shown at level 0.0366, step 1, values float32 
    11513 
    11514 > open
    11515 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_10_00398_volume.mrc
    11516 
    11517 Opened J307_class_10_00398_volume.mrc as #30, grid size 120,120,120, pixel
    11518 2.27, shown at level 0.0414, step 1, values float32 
    11519 
    11520 > open
    11521 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_09_00398_volume.mrc
    11522 
    11523 Opened J307_class_09_00398_volume.mrc as #31, grid size 120,120,120, pixel
    11524 2.27, shown at level 0.0362, step 1, values float32 
    11525 
    11526 > open
    11527 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_08_00398_volume.mrc
    11528 
    11529 Opened J307_class_08_00398_volume.mrc as #32, grid size 120,120,120, pixel
    11530 2.27, shown at level 0.0342, step 1, values float32 
    11531 
    11532 > open
    11533 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_07_00398_volume.mrc
    11534 
    11535 Opened J307_class_07_00398_volume.mrc as #33, grid size 120,120,120, pixel
    11536 2.27, shown at level 0.0405, step 1, values float32 
    11537 
    11538 > open
    11539 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_06_00398_volume.mrc
    11540 
    11541 Opened J307_class_06_00398_volume.mrc as #34, grid size 120,120,120, pixel
    11542 2.27, shown at level 0.0355, step 1, values float32 
    11543 
    11544 > open
    11545 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_05_00398_volume.mrc
    11546 
    11547 Opened J307_class_05_00398_volume.mrc as #35, grid size 120,120,120, pixel
    11548 2.27, shown at level 0.0398, step 1, values float32 
    11549 
    11550 > open
    11551 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_04_00398_volume.mrc
    11552 
    11553 Opened J307_class_04_00398_volume.mrc as #36, grid size 120,120,120, pixel
    11554 2.27, shown at level 0.0268, step 1, values float32 
    11555 
    11556 > open
    11557 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_03_00398_volume.mrc
    11558 
    11559 Opened J307_class_03_00398_volume.mrc as #37, grid size 120,120,120, pixel
    11560 2.27, shown at level 0.0428, step 1, values float32 
    11561 
    11562 > open
    11563 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_02_00398_volume.mrc
    11564 
    11565 Opened J307_class_02_00398_volume.mrc as #38, grid size 120,120,120, pixel
    11566 2.27, shown at level 0.0405, step 1, values float32 
    11567 
    11568 > open
    11569 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_01_00398_volume.mrc
    11570 
    11571 Opened J307_class_01_00398_volume.mrc as #39, grid size 120,120,120, pixel
    11572 2.27, shown at level 0.0466, step 1, values float32 
    11573 
    11574 > open
    11575 > /Users/victor/Downloads/cryosparc_P1_J307_00398_volume_series/J307_class_00_00398_volume.mrc
    11576 
    11577 Opened J307_class_00_00398_volume.mrc as #40, grid size 120,120,120, pixel
    11578 2.27, shown at level 0.0369, step 1, values float32 
    11579 
    11580 > hide #!14 models
    11581 
    11582 > hide #!27 models
    11583 
    11584 > hide #!28 models
    11585 
    11586 > show #!28 models
    11587 
    11588 > show #!27 models
    11589 
    11590 > surface dust #26 size 22.8
    11591 
    11592 > surface dust #27 size 22.8
    11593 
    11594 > surface dust #28 size 22.8
    11595 
    11596 > surface dust #29 size 22.8
    11597 
    11598 > surface dust #30 size 22.8
    11599 
    11600 > surface dust #31 size 22.8
    11601 
    11602 > surface dust #32 size 22.8
    11603 
    11604 > surface dust #33 size 22.8
    11605 
    11606 > surface dust #34 size 22.8
    11607 
    11608 > surface dust #35 size 22.8
    11609 
    11610 > surface dust #36 size 22.8
    11611 
    11612 > surface dust #37 size 22.8
    11613 
    11614 > surface dust #38 size 22.8
    11615 
    11616 > surface dust #39 size 22.8
    11617 
    11618 > surface dust #40 size 22.8
    11619 
    11620 > hide #!40 models
    11621 
    11622 > hide #!39 models
    11623 
    11624 > hide #!38 models
    11625 
    11626 > hide #!37 models
    11627 
    11628 > hide #!36 models
    11629 
    11630 > hide #!35 models
    11631 
    11632 > hide #!34 models
    11633 
    11634 > hide #!33 models
    11635 
    11636 > hide #!32 models
    11637 
    11638 > hide #!31 models
    11639 
    11640 > hide #!30 models
    11641 
    11642 > hide #!29 models
    11643 
    11644 > hide #!28 models
    11645 
    11646 > hide #!27 models
    11647 
    11648 > volume #26 level 0.128
    11649 
    11650 > hide #!26 models
    11651 
    11652 > show #!40 models
    11653 
    11654 > volume #40 level 0.09832
    11655 
    11656 > hide #!40 models
    11657 
    11658 > show #!39 models
    11659 
    11660 > hide #!39 models
    11661 
    11662 > show #!39 models
    11663 
    11664 > volume #39 level 0.1183
    11665 
    11666 > volume #39 level 0.1947
    11667 
    11668 > hide #!39 models
    11669 
    11670 > show #!38 models
    11671 
    11672 > close #38
    11673 
    11674 > show #!37 models
    11675 
    11676 > volume #37 level 0.1356
    11677 
    11678 > show #!36 models
    11679 
    11680 > hide #!37 models
    11681 
    11682 > volume #36 level 0.1247
    11683 
    11684 > show #!37 models
    11685 
    11686 > hide #!37 models
    11687 
    11688 > hide #!36 models
    11689 
    11690 > show #!35 models
    11691 
    11692 > hide #!35 models
    11693 
    11694 > show #!34 models
    11695 
    11696 > hide #!34 models
    11697 
    11698 > show #!34 models
    11699 
    11700 > volume #34 level 0.1746
    11701 
    11702 > show #!33 models
    11703 
    11704 > hide #!34 models
    11705 
    11706 > volume #33 level 0.1349
    11707 
    11708 > show #!32 models
    11709 
    11710 > hide #!33 models
    11711 
    11712 > volume #32 level 0.1707
    11713 
    11714 > volume #32 level 0.1849
    11715 
    11716 > hide #!32 models
    11717 
    11718 > show #!31 models
    11719 
    11720 > volume #31 level 0.1818
    11721 
    11722 > volume #30 level 0.1623
    11723 
    11724 > hide #!30 models
    11725 
    11726 > show #!39 models
    11727 
    11728 > show #!36 models
    11729 
    11730 > fitmap #36 inMap #39
    11731 
    11732 Fit map J307_class_04_00398_volume.mrc in map J307_class_01_00398_volume.mrc
    11733 using 7940 points 
    11734 correlation = 0.9636, correlation about mean = 0.8292, overlap = 810.9 
    11735 steps = 60, shift = 0.151, angle = 0.497 degrees 
    11736  
    11737 Position of J307_class_04_00398_volume.mrc (#36) relative to
    11738 J307_class_01_00398_volume.mrc (#39) coordinates: 
    11739 Matrix rotation and translation 
    11740 0.99999590 -0.00146028 0.00246488 -0.13495374 
    11741 0.00148043 0.99996533 -0.00819411 0.92964911 
    11742 -0.00245283 0.00819773 0.99996339 -0.65526131 
    11743 Axis 0.94398836 0.28320608 0.16935255 
    11744 Axis point 0.00000000 80.94811463 112.24962481 
    11745 Rotation angle (degrees) 0.49746114 
    11746 Shift along axis 0.02491735 
    11747  
    11748 
    11749 > hide #!36 models
    11750 
    11751 > hide #!39 models
    11752 
    11753 > show #!36 models
    11754 
    11755 > volume #36 level 0.05849
    11756 
    11757 > show #!39 models
    11758 
    11759 > hide #!36 models
    11760 
    11761 > volume #39 level 0.295
    11762 
    11763 > volume #39 level 0.2997
    11764 
    11765 > show #!36 models
    11766 
    11767 > volume #36 level 0.2284
    11768 
    11769 > hide #!36 models
    11770 
    11771 > volume #39 level 0.2639
    11772 
    11773 > open /Users/victor/Downloads/cryosparc_P1_J314_011_volume_map.mrc
    11774 
    11775 Opened cryosparc_P1_J314_011_volume_map.mrc as #38, grid size 360,360,360,
    11776 pixel 0.758, shown at level 0.00484, step 2, values float32 
    11777 
    11778 > open /Users/victor/Downloads/cryosparc_P1_J315_011_volume_map.mrc
    11779 
    11780 Opened cryosparc_P1_J315_011_volume_map.mrc as #41, grid size 360,360,360,
    11781 pixel 0.758, shown at level 0.00603, step 2, values float32 
    11782 
    11783 > hide #!38 models
    11784 
    11785 > hide #!39 models
    11786 
    11787 > show #!38 models
    11788 
    11789 > fitmap #38 inMap #41
    11790 
    11791 Fit map cryosparc_P1_J314_011_volume_map.mrc in map
    11792 cryosparc_P1_J315_011_volume_map.mrc using 58297 points 
    11793 correlation = 0.8979, correlation about mean = 0.8295, overlap = 170.1 
    11794 steps = 128, shift = 0.272, angle = 1.11 degrees 
    11795  
    11796 Position of cryosparc_P1_J314_011_volume_map.mrc (#38) relative to
    11797 cryosparc_P1_J315_011_volume_map.mrc (#41) coordinates: 
    11798 Matrix rotation and translation 
    11799 0.99982653 -0.01704003 0.00751984 1.24541609 
    11800 0.01700119 0.99984195 0.00519918 -2.97485137 
    11801 -0.00760725 -0.00507043 0.99995821 1.54050223 
    11802 Axis -0.26577237 0.39148153 0.88096950 
    11803 Axis point 172.43380176 69.17271031 0.00000000 
    11804 Rotation angle (degrees) 1.10704124 
    11805 Shift along axis -0.13846108 
    11806  
    11807 
    11808 > hide #!41 models
    11809 
    11810 > volume #38 step 1
    11811 
    11812 > volume #41 step 1
    11813 
    11814 > volume #38 level 0.03987
    11815 
    11816 > hide #!38 models
    11817 
    11818 > show #!41 models
    11819 
    11820 > volume #41 level 0.02598
    11821 
    11822 > volume #41 level 0.04073
    11823 
    11824 > volume #41 level 0.006897
    11825 
    11826 > open /Users/victor/Downloads/cryosparc_P89_J216_012_volume_map.mrc
    11827 
    11828 Opened cryosparc_P89_J216_012_volume_map.mrc as #42, grid size 360,360,360,
    11829 pixel 0.758, shown at level 0.00604, step 2, values float32 
    11830 
    11831 > hide #!41 models
    11832 
    11833 > volume #42 step 1
    11834 
    11835 > volume #42 level 0.01832
    11836 
    11837 > surface dust #42 size 7.58
    11838 
    11839 > volume #42 level 0.05517
    11840 
    11841 > open /Users/victor/Downloads/cryosparc_P89_J216_012_volume_map.mrc
    11842 
    11843 Opened cryosparc_P89_J216_012_volume_map.mrc as #43, grid size 360,360,360,
    11844 pixel 0.758, shown at level 0.00604, step 2, values float32 
    11845 
    11846 > open /Users/victor/Downloads/cryosparc_P20_J319_009_volume_map.mrc
    11847 
    11848 Opened cryosparc_P20_J319_009_volume_map.mrc as #44, grid size 360,360,360,
    11849 pixel 1.11, shown at level 0.00936, step 2, values float32 
    11850 
    11851 > hide #!42 models
    11852 
    11853 > hide #!43 models
    11854 
    11855 > volume #44 step 1
    11856 
    11857 > surface dust #44 size 11.1
    11858 
    11859 > volume #44 level 0.1428
    11860 
    11861 > open /Users/victor/Downloads/cryosparc_P20_J297_008_volume_map.mrc
    11862 
    11863 Opened cryosparc_P20_J297_008_volume_map.mrc as #45, grid size 200,200,200,
    11864 pixel 1.38, shown at level 0.0428, step 1, values float32 
    11865 
    11866 > hide #!44 models
    11867 
    11868 > volume #45 level 0.1488
    11869 
    11870 > volume #45 level 0.1097
    11871 
    11872 > volume #45 level 0.1581
    11873 
    11874 > show #!44 models
    11875 
    11876 > volume #44 level 0.1991
    11877 
    11878 > volume #45 level 0.2807
    11879 
    11880 > close #44-45
    11881 
    11882 > show #!43 models
    11883 
    11884 > surface dust #43 size 7.58
    11885 
    11886 > volume #43 step 1
    11887 
    11888 > volume #43 level 0.03675
    11889 
    11890 > hide #!43 models
    11891 
    11892 > show #!43 models
    11893 
    11894 > close #43
    11895 
    11896 > show #!42 models
    11897 
    11898 > close #42
    11899 
    11900 > show #!41 models
    11901 
    11902 > volume #41 level 0.03379
    11903 
    11904 > show #!40 models
    11905 
    11906 > hide #!41 models
    11907 
    11908 > show #!39 models
    11909 
    11910 > close #40
    11911 
    11912 > close #39
    11913 
    11914 > show #!38 models
    11915 
    11916 > fitmap #38 inMap #41
    11917 
    11918 Fit map cryosparc_P1_J314_011_volume_map.mrc in map
    11919 cryosparc_P1_J315_011_volume_map.mrc using 139198 points 
    11920 correlation = 0.9445, correlation about mean = 0.8174, overlap = 1248 
    11921 steps = 60, shift = 0.0152, angle = 0.067 degrees 
    11922  
    11923 Position of cryosparc_P1_J314_011_volume_map.mrc (#38) relative to
    11924 cryosparc_P1_J315_011_volume_map.mrc (#41) coordinates: 
    11925 Matrix rotation and translation 
    11926 0.99982905 -0.01688265 0.00753913 1.22244366 
    11927 0.01683486 0.99983807 0.00635698 -3.10809290 
    11928 -0.00764523 -0.00622897 0.99995137 1.69017730 
    11929 Axis -0.32220441 0.38872453 0.86317875 
    11930 Axis point 181.96960285 67.83387245 0.00000000 
    11931 Rotation angle (degrees) 1.11911573 
    11932 Shift along axis -0.14314354 
    11933  
    11934 
    11935 > hide #!38 models
    11936 
    11937 > show #!38 models
    11938 
    11939 > hide #!41 models
    11940 
    11941 > show #!37 models
    11942 
    11943 > show #!41 models
    11944 
    11945 > hide #!38 models
    11946 
    11947 > hide #!37 models
    11948 
    11949 > close #38,41
    11950 
    11951 > open /Users/victor/Downloads/cryosparc_P1_J314_011_volume_map.mrc
    11952 
    11953 Opened cryosparc_P1_J314_011_volume_map.mrc as #38, grid size 360,360,360,
    11954 pixel 0.758, shown at level 0.00484, step 2, values float32 
    11955 
    11956 > open /Users/victor/Downloads/cryosparc_P1_J315_011_volume_map.mrc
    11957 
    11958 Opened cryosparc_P1_J315_011_volume_map.mrc as #39, grid size 360,360,360,
    11959 pixel 0.758, shown at level 0.00603, step 2, values float32 
    11960 
    11961 > surface dust #38 size 7.58
    11962 
    11963 > surface dust #39 size 7.58
    11964 
    11965 > volume #38 step 1
    11966 
    11967 > volume #39 step 1
    11968 
    11969 > volume #38 level 0.03135
    11970 
    11971 > hide #!38 models
    11972 
    11973 > hide #!39 models
    11974 
    11975 > show #!38 models
    11976 
    11977 > volume #38 level 0.0446
    11978 
    11979 > show #!39 models
    11980 
    11981 > hide #!38 models
    11982 
    11983 > volume #39 level 0.01904
    11984 
    11985 > volume #39 level 0.003427
    11986 
    11987 > volume gaussian #39 sDev 2
    11988 
    11989 Opened cryosparc_P1_J315_011_volume_map.mrc gaussian as #40, grid size
    11990 360,360,360, pixel 0.758, shown at step 1, values float32 
    11991 
    11992 > volume #40 level 0.0001601
    11993 
    11994 > volume #40 level 0.0009332
    11995 
    11996 > show #!39 models
    11997 
    11998 > hide #!39 models
    11999 
    12000 > show #!39 models
    12001 
    12002 > hide #!39 models
    12003 
    12004 > hide #!40 models
    12005 
    12006 > show #!40 models
    12007 
    12008 > volume #40 color #99bfe584
    12009 
    12010 > volume #40 color #99bfe585
    12011 
    12012 > volume #40 level 0.0005466
    12013 
    12014 > save /Users/victor/Desktop/J315whole.mrc models #40
    12015 
    12016 > hide #!40 models
    12017 
    12018 > open /Users/victor/Downloads/cryosparc_P1_J320_mask.mrc
    12019 
    12020 Opened cryosparc_P1_J320_mask.mrc as #41, grid size 360,360,360, pixel 0.758,
    12021 shown at level 1, step 2, values float32 
    12022 
    12023 > volume #41 step 1
    12024 
    12025 > volume #41 level 0.05566
    12026 
    12027 > volume #41 color #cccc9984
    12028 
    12029 > volume #41 color #cccc9985
    12030 
    12031 > open /Users/victor/Downloads/cryosparc_P1_J281_004_volume_map.mrc
    12032 
    12033 Opened cryosparc_P1_J281_004_volume_map.mrc as #42, grid size 360,360,360,
    12034 pixel 0.758, shown at level 0.00826, step 2, values float32 
    12035 
    12036 > open /Users/victor/Downloads/cryosparc_P1_J282_003_volume_map.mrc
    12037 
    12038 Opened cryosparc_P1_J282_003_volume_map.mrc as #43, grid size 360,360,360,
    12039 pixel 0.758, shown at level 0.0101, step 2, values float32 
    12040 
    12041 > hide #!39 models
    12042 
    12043 > hide #!41 models
    12044 
    12045 > surface dust #42 size 7.58
    12046 
    12047 > surface dust #43 size 7.58
    12048 
    12049 > fitmap #42 inMap #43
    12050 
    12051 Fit map cryosparc_P1_J281_004_volume_map.mrc in map
    12052 cryosparc_P1_J282_003_volume_map.mrc using 58217 points 
    12053 correlation = 0.9598, correlation about mean = 0.9308, overlap = 136.1 
    12054 steps = 132, shift = 1.03, angle = 0.668 degrees 
    12055  
    12056 Position of cryosparc_P1_J281_004_volume_map.mrc (#42) relative to
    12057 cryosparc_P1_J282_003_volume_map.mrc (#43) coordinates: 
    12058 Matrix rotation and translation 
    12059 0.99996313 0.00609024 -0.00605423 -0.05107346 
    12060 -0.00604229 0.99995048 0.00790702 -0.77639781 
    12061 0.00610208 -0.00787015 0.99995041 -0.59825243 
    12062 Axis -0.67650701 -0.52124876 -0.52022879 
    12063 Axis point 0.00000000 -26.71368751 48.55055275 
    12064 Rotation angle (degrees) 0.66812749 
    12065 Shift along axis 0.75047608 
    12066  
    12067 
    12068 > hide #!42 models
    12069 
    12070 > show #!42 models
    12071 
    12072 > hide #!43 models
    12073 
    12074 > show #!43 models
    12075 
    12076 > hide #!43 models
    12077 
    12078 > show #!43 models
    12079 
    12080 > hide #!43 models
    12081 
    12082 > show #!43 models
    12083 
    12084 > volume #42 step 1
    12085 
    12086 > volume #43 step 1
    12087 
    12088 > volume #42 level 0.01462
    12089 
    12090 > volume #43 level 0.02968
    12091 
    12092 > volume #42 level 0.0328
    12093 
    12094 > volume #43 level 0.0439
    12095 
    12096 > volume #42 level 0.05007
    12097 
    12098 > volume #43 level 0.06346
    12099 
    12100 > hide #!42 models
    12101 
    12102 > show #!42 models
    12103 
    12104 > hide #!42 models
    12105 
    12106 > show #!42 models
    12107 
    12108 > hide #!42 models
    12109 
    12110 > hide #!43 models
    12111 
    12112 > show #!43 models
    12113 
    12114 > show #!42 models
    12115 
    12116 > hide #!43 models
    12117 
    12118 > show #!43 models
    12119 
    12120 > hide #!43 models
    12121 
    12122 > show #!43 models
    12123 
    12124 > hide #!43 models
    12125 
    12126 > show #!43 models
    12127 
    12128 > hide #!43 models
    12129 
    12130 > show #!43 models
    12131 
    12132 > hide #!43 models
    12133 
    12134 > show #!43 models
    12135 
    12136 > hide #!43 models
    12137 
    12138 > show #!43 models
    12139 
    12140 > hide #!43 models
    12141 
    12142 > show #!43 models
    12143 
    12144 > hide #!42 models
    12145 
    12146 > show #!42 models
    12147 
    12148 > hide #!42 models
    12149 
    12150 > show #!42 models
    12151 
    12152 > hide #!42 models
    12153 
    12154 > show #!42 models
    12155 
    12156 > hide #!43 models
    12157 
    12158 > show #!43 models
    12159 
    12160 > open /Users/victor/Downloads/cryosparc_P1_J284_004_volume_map.mrc
    12161 
    12162 Opened cryosparc_P1_J284_004_volume_map.mrc as #44, grid size 360,360,360,
    12163 pixel 0.758, shown at level 0.00857, step 2, values float32 
    12164 
    12165 > open /Users/victor/Downloads/cryosparc_P1_J283_005_volume_map.mrc
    12166 
    12167 Opened cryosparc_P1_J283_005_volume_map.mrc as #45, grid size 360,360,360,
    12168 pixel 0.758, shown at level 0.00842, step 2, values float32 
    12169 
    12170 > surface dust #42 size 7.58
    12171 
    12172 > surface dust #43 size 7.58
    12173 
    12174 > surface dust #44 size 7.58
    12175 
    12176 > surface dust #45 size 7.58
    12177 
    12178 > volume #44 step 1
    12179 
    12180 > volume #45 step 1
    12181 
    12182 > hide #!42 models
    12183 
    12184 > hide #!43 models
    12185 
    12186 > volume #44 level 0.02259
    12187 
    12188 > volume #45 level 0.03338
    12189 
    12190 > volume #44 level 0.04363
    12191 
    12192 > volume #45 level 0.0454
    12193 
    12194 > fitmap #44 inMap #45
    12195 
    12196 Fit map cryosparc_P1_J284_004_volume_map.mrc in map
    12197 cryosparc_P1_J283_005_volume_map.mrc using 92985 points 
    12198 correlation = 0.9924, correlation about mean = 0.9623, overlap = 937.2 
    12199 steps = 72, shift = 0.662, angle = 2.17 degrees 
    12200  
    12201 Position of cryosparc_P1_J284_004_volume_map.mrc (#44) relative to
    12202 cryosparc_P1_J283_005_volume_map.mrc (#45) coordinates: 
    12203 Matrix rotation and translation 
    12204 0.99933891 0.03284767 0.01558122 -6.29073574 
    12205 -0.03268148 0.99940742 -0.01080371 6.52722931 
    12206 -0.01592687 0.01028735 0.99982024 0.43562463 
    12207 Axis 0.27858519 0.41618052 -0.86555419 
    12208 Axis point 188.61662224 200.28639331 -0.00000000 
    12209 Rotation angle (degrees) 2.16938533 
    12210 Shift along axis 0.58694316 
    12211  
    12212 
    12213 > hide #!45 models
    12214 
    12215 > hide #!44 models
    12216 
    12217 > show #!43 models
    12218 
    12219 > show #!42 models
    12220 
    12221 > hide #!43 models
    12222 
    12223 > show #!43 models
    12224 
    12225 > hide #!43 models
    12226 
    12227 > show #!43 models
    12228 
    12229 > hide #!43 models
    12230 
    12231 > hide #!42 models
    12232 
    12233 > show #!42 models
    12234 
    12235 > show #!44 models
    12236 
    12237 > hide #!44 models
    12238 
    12239 > show #!45 models
    12240 
    12241 > hide #!45 models
    12242 
    12243 > show #!45 models
    12244 
    12245 > hide #!45 models
    12246 
    12247 > show #!43 models
    12248 
    12249 > close #42-43
    12250 
    12251 > show #!44 models
    12252 
    12253 > show #!45 models
    12254 
    12255 > hide #!44 models
    12256 
    12257 > close #44-45
    12258 
    12259 > open /Users/victor/Downloads/cryosparc_P1_J247_007_volume_map.mrc
    12260 
    12261 Opened cryosparc_P1_J247_007_volume_map.mrc as #42, grid size 360,360,360,
    12262 pixel 0.758, shown at level 0.00811, step 2, values float32 
    12263 
    12264 > open /Users/victor/Downloads/cryosparc_P1_J252_009_volume_map.mrc
    12265 
    12266 Opened cryosparc_P1_J252_009_volume_map.mrc as #43, grid size 360,360,360,
    12267 pixel 0.758, shown at level 0.00646, step 2, values float32 
    12268 
    12269 > open /Users/victor/Downloads/cryosparc_P1_J254_010_volume_map.mrc
    12270 
    12271 Opened cryosparc_P1_J254_010_volume_map.mrc as #44, grid size 360,360,360,
    12272 pixel 0.758, shown at level 0.00752, step 2, values float32 
    12273 
    12274 > open /Users/victor/Downloads/cryosparc_P1_J250_010_volume_map.mrc
    12275 
    12276 Opened cryosparc_P1_J250_010_volume_map.mrc as #45, grid size 360,360,360,
    12277 pixel 0.758, shown at level 0.00742, step 2, values float32 
    12278 
    12279 > surface dust #42 size 7.58
    12280 
    12281 > surface dust #43 size 7.58
    12282 
    12283 > surface dust #44 size 7.58
    12284 
    12285 > surface dust #45 size 7.58
    12286 
    12287 > hide #!43 models
    12288 
    12289 > hide #!44 models
    12290 
    12291 > hide #!45 models
    12292 
    12293 > volume #42 step 1
    12294 
    12295 > volume #43 step 1
    12296 
    12297 > volume #44 step 1
    12298 
    12299 > volume #45 step 1
    12300 
    12301 > volume #45 level 0.07815
    12302 
    12303 > volume #44 level 0.08923
    12304 
    12305 > volume #43 level 0.0802
    12306 
    12307 > volume #42 level 0.08578
    12308 
    12309 > hide #!43 models
    12310 
    12311 > hide #!44 models
    12312 
    12313 > hide #!45 models
    12314 
    12315 > show #!45 models
    12316 
    12317 > show #!44 models
    12318 
    12319 > hide #!42 models
    12320 
    12321 > hide #!45 models
    12322 
    12323 > show #!43 models
    12324 
    12325 > show #!45 models
    12326 
    12327 > show #!42 models
    12328 
    12329 > hide #!43 models
    12330 
    12331 > hide #!44 models
    12332 
    12333 > show #!43 models
    12334 
    12335 > hide #!43 models
    12336 
    12337 > show #!43 models
    12338 
    12339 > hide #!43 models
    12340 
    12341 > show #!43 models
    12342 
    12343 > hide #!43 models
    12344 
    12345 > show #!44 models
    12346 
    12347 > hide #!44 models
    12348 
    12349 > show #!44 models
    12350 
    12351 > hide #!44 models
    12352 
    12353 > show #!44 models
    12354 
    12355 > hide #!44 models
    12356 
    12357 > hide #!45 models
    12358 
    12359 > show #!45 models
    12360 
    12361 > show #!44 models
    12362 
    12363 > show #!43 models
    12364 
    12365 > hide #!42 models
    12366 
    12367 > hide #!45 models
    12368 
    12369 > hide #!44 models
    12370 
    12371 > volume #43 level 0.0162
    12372 
    12373 > volume #43 level 0.01121
    12374 
    12375 > ui tool show "Segment Map"
    12376 
    12377 > hide #!43 models
    12378 
    12379 > show #!43 models
    12380 
    12381 Segmenting cryosparc_P1_J252_009_volume_map.mrc, density threshold 0.011213 
    12382 Showing 177 region surfaces 
    12383 2893 watershed regions, grouped to 177 regions 
    12384 Showing cryosparc_P1_J252_009_volume_map.seg - 177 regions, 177 surfaces 
    12385 
    12386 > surface dust #43 size 7.58
    12387 
    12388 > undo
    12389 
    12390 > close #46
    12391 
    12392 > show #!43 models
    12393 
    12394 > volume gaussian #43 sDev 2
    12395 
    12396 Opened cryosparc_P1_J252_009_volume_map.mrc gaussian as #46, grid size
    12397 360,360,360, pixel 0.758, shown at step 1, values float32 
    12398 
    12399 > ui tool show "Segment Map"
    12400 
    12401 > volume #46 level 0.00629
    12402 
    12403 > volume #46 level 0.006787
    12404 
    12405 > hide #!44 models
    12406 
    12407 > volume #46 color #99bfe583
    12408 
    12409 > volume #46 color #99bfe585
    12410 
    12411 > show #!43 models
    12412 
    12413 > hide #!43 models
    12414 
    12415 > volume #46 level 0.004634
    12416 
    12417 Segmenting cryosparc_P1_J252_009_volume_map.mrc gaussian, density threshold
    12418 0.004634 
    12419 Showing 41 region surfaces 
    12420 159 watershed regions, grouped to 41 regions 
    12421 Showing cryosparc_P1_J252_009_volume_map gaussian.seg - 41 regions, 41
    12422 surfaces 
    12423 
    12424 > ui mousemode right select
    12425 
    12426 Drag select of 239, 46227 of 47152 triangles, 231, 122 of 42736 triangles,
    12427 232, 28638 of 34176 triangles, 228, 227, 12071 of 27640 triangles, 230, 3097
    12428 of 17336 triangles, 179, 14093 of 17788 triangles, 220, 9523 of 17220
    12429 triangles, 18, 12325 of 13452 triangles, 46
    12430 cryosparc_P1_J252_009_volume_map.mrc gaussian 
    12431 
    12432 > select subtract #47.3
    12433 
    12434 10 models selected 
    12435 Grouped 8 regions 
    12436 
    12437 > select subtract #46
    12438 
    12439 1 model selected 
    12440 
    12441 > hide #!46 models
    12442 
    12443 > select add #47
    12444 
    12445 35 models selected 
    12446 
    12447 > select subtract #47
    12448 
    12449 Nothing selected 
    12450 Drag select of 229, 36159 of 48336 triangles, 231, 32084 of 42736 triangles,
    12451 235, 1468 of 37852 triangles, 236, 1732 of 36320 triangles, 238, 1616 of 31048
    12452 triangles, 182, 15463 of 18108 triangles, 217, 1271 of 18308 triangles, 184,
    12453 1866 of 17908 triangles, 218, 4433 of 17528 triangles, 174, 13798 of 15956
    12454 triangles, 211, 4327 of 17228 triangles, 192, 10359 of 10852 triangles, 201,
    12455 1187 of 8340 triangles 
    12456 
    12457 > select #47.6
    12458 
    12459 1 model selected 
    12460 Ungrouped to 3 regions 
    12461 
    12462 > select #47.7
    12463 
    12464 1 model selected 
    12465 Ungrouped to 4 regions 
    12466 
    12467 > select #47.21
    12468 
    12469 1 model selected 
    12470 Ungrouped to 0 regions 
    12471 
    12472 > select #47.9
    12473 
    12474 1 model selected 
    12475 Ungrouped to 3 regions 
    12476 
    12477 > select #47.34
    12478 
    12479 1 model selected 
    12480 Ungrouped to 2 regions 
    12481 
    12482 > select #47.32
    12483 
    12484 1 model selected 
    12485 Ungrouped to 3 regions 
    12486 
    12487 > select #47.5
    12488 
    12489 1 model selected 
    12490 Ungrouped to 3 regions 
    12491 
    12492 > select #47.46
    12493 
    12494 1 model selected 
    12495 Ungrouped to 2 regions 
    12496 
    12497 > select #47.1
    12498 
    12499 1 model selected 
    12500 
    12501 > select add #47.14
    12502 
    12503 2 models selected 
    12504 
    12505 > select subtract #47.1
    12506 
    12507 1 model selected 
    12508 
    12509 > select add #47.3
    12510 
    12511 2 models selected 
    12512 
    12513 > select add #47.1
    12514 
    12515 3 models selected 
    12516 
    12517 > select add #47.37
    12518 
    12519 4 models selected 
    12520 
    12521 > select add #47.29
    12522 
    12523 5 models selected 
    12524 
    12525 > select subtract #47.3
    12526 
    12527 4 models selected 
    12528 
    12529 > select add #47.3
    12530 
    12531 5 models selected 
    12532 
    12533 > select subtract #47.3
    12534 
    12535 4 models selected 
    12536 Grouped 4 regions 
    12537 
    12538 > select #47.3
    12539 
    12540 1 model selected 
    12541 Ungrouped to 2 regions 
    12542 
    12543 > select #47.14
    12544 
    12545 1 model selected 
    12546 Ungrouped to 0 regions 
    12547 
    12548 > select #47.14
    12549 
    12550 1 model selected 
    12551 
    12552 > select add #47.29
    12553 
    12554 2 models selected 
    12555 
    12556 > select #47.14
    12557 
    12558 1 model selected 
    12559 Ungrouped to 0 regions 
    12560 
    12561 > select #47.14
    12562 
    12563 1 model selected 
    12564 
    12565 > select add #47.29
    12566 
    12567 2 models selected 
    12568 
    12569 > select add #47.1
    12570 
    12571 3 models selected 
    12572 
    12573 > select add #47.30
    12574 
    12575 4 models selected 
    12576 
    12577 > select add #47.42
    12578 
    12579 5 models selected 
    12580 
    12581 > select subtract #47.14
    12582 
    12583 4 models selected 
    12584 
    12585 > select add #47.21
    12586 
    12587 5 models selected 
    12588 
    12589 > select add #47.14
    12590 
    12591 6 models selected 
    12592 
    12593 > select add #47.28
    12594 
    12595 7 models selected 
    12596 
    12597 > select add #47.40
    12598 
    12599 8 models selected 
    12600 Grouped 8 regions 
    12601 
    12602 > select #47.48
    12603 
    12604 1 model selected 
     2122[deleted to fit within ticket limits]
     2123
    126052124
    126062125> select #47.11