Changes between Version 22 and Version 23 of NIAID2022

Timestamp:

Oct 13, 2022, 1:36:38 PM (3 years ago)

Author:

Elaine Meng

Comment:

--

NIAID2022

@@ -61 +61 @@
 == 9/29/2022 ==
 
+Phil, Kristen, Michal, Meghan; Eric, Elaine, Greg, TomG, Zach
+
+Phil: It's crunch time for NIH3D.  Kristen has two questions...
+
+Kristen: re presets, we are missing output for rainbow-vis, ribbon-bychain-vis, ribbon-secondary-vis. Phil: these presets are in the menu, they just aren't named with "vis." Kristen: we are getting outputs for the printable versions but not the visualization versions. Eric: I will fix the script to also generate outputs for those. Phil: the presets exist. Michal: These are updates to the scripts rather than the presets themselves.
+
+Kristen: we also want to synchronize with your ChimeraX 1.5 release.  What is the timeframe?  TomG: release candidate starting today, typically wait 2 weeks to a month to make it official.  So a rough estimate is mid-November. but it really depends on the bug reports that come in.  Phil: so we should get the release candidate. Kristen: will we be notified automatically when it's available?  ChimeraX team: we don't email the whole list for the candidate but we can email NIAID folks about it. TomG: typically release about twice a year.
+
+Kristen: we need to release NIH3D in December.
+
+What's new: dockprep command, axes/planes/centroids, MOLEonline reader, ...
+
+TomG: would it be useful to be able to color the channel by properties?  Phil: yes our collaborator was interested in something like that, although we did not discuss details. The mutation of interest changed the pore.  Elaine: probably more interesting/helpful to show surface of marker model and then color by protein's ESP or MLP.
+
+Phil: the HOLE results looked better because the surface was smoother (planes and resulting spheres closer together). TomG: molecular surface on marker model would also help take care of that.
+
+TomG: been doing more VR recently. New more expensive Quest system has been announced. 
+
+== 9/29/2022 ==
+
 Phil, Darrell, Meghan; Eric, Elaine, Greg, TomG, Zach, Scooter (briefly)