|
|
oslTestAbbr
|
oslTestAbbr ( self, a )
|
|
|
findPseudoBond
|
findPseudoBond ( self, i )
|
|
|
associated
|
associated (
self,
otherAtom,
category,
)
|
|
|
setCoord
|
setCoord ( self, c )
|
|
|
primaryBonds
|
primaryBonds ( self )
|
|
|
oslChildren
|
oslChildren ( self )
|
|
|
coordination
|
coordination ( self, valueIfUnknown )
|
|
|
rootAtom
|
rootAtom ( self, ignoreBreakPoints )
|
|
|
minimumRings
|
minimumRings ( self, crossResidues )
|
|
|
allRings
|
allRings (
self,
crossResidues,
sizeThreshold,
)
|
|
|
getIdatmInfoMap
|
getIdatmInfoMap ( self )
|
|
|
connectsTo
|
connectsTo ( self, a )
|
|
|
vdwPoints
|
vdwPoints ( self )
|
|
|
traverseFrom
|
traverseFrom ( self, ignoreBreakPoints )
|
|
|
associations
|
associations (
self,
category,
otherAtom,
)
|
|
|
oslParents
|
oslParents ( self )
|
|
|
revertDefaultRadius
|
revertDefaultRadius ( self )
|
|
|
oslIdent
|
oslIdent (
self,
start,
end,
)
|
|
|
addBond
|
addBond ( self, element )
|
|
|
IdatmInfo
|
IdatmInfo ( self )
|
|
|
allLocations
|
allLocations ( self )
|
|
|
removePseudoBond
|
removePseudoBond ( self, element )
|
|
|
clearVdwPoints
|
clearVdwPoints ( self )
|
|
|
primaryNeighbors
|
primaryNeighbors ( self )
|
|
|
xformCoord
|
xformCoord ( self )
|
|
|
removeBond
|
removeBond ( self, element )
|
|
|
oslLevel
|
oslLevel ( self )
|
|
|
addPseudoBond
|
addPseudoBond ( self, element )
|
|
|
findBond
|
findBond ( self, a )
|
|