HappyDoc Generated Documentation ./_chimera

. / _chimera 

Functions   
  RMSD_fillMatrix 
RMSD_fillMatrix (
        M,
        Si,
        Sj,
        )
  clearPickSelectable 
clearPickSelectable ()
  intersects 
intersects ( p,  box )
  eigenMatrix 
eigenMatrix (
        q0,
        q1,
        q2,
        q3,
        )
  initializeColors 
initializeColors ( nogui )
  bondsBetween 
bondsBetween (
        r0,
        r1,
        onlyOne,
        )
  find_minimum_bounding_sphere 
find_minimum_bounding_sphere ( pts )
  find_bounding_sphere 
find_bounding_sphere ( pts )
  RMSD_matrix 
RMSD_matrix (
        l,
        m,
        n,
        s,
        )
  pathFinder 
pathFinder ()
  restmplFindResidue 
restmplFindResidue (
        name,
        start,
        end,
        )
  pdbOrder 
pdbOrder ( resName )
  opengl_platform 
opengl_platform ()
  sqdistance 
sqdistance ( l,  r )
  angle 
angle ( v0,  v1 )
  opengl_version 
opengl_version ()
  numpyArrayFromAtoms 
numpyArrayFromAtoms ( atoms,  crdSet )
  tweak_graphics 
tweak_graphics ( parameter,  value )
  cross 
cross ( l,  r )
  memoryMap 
memoryMap (
        start,
        len,
        type,
        )
  atomsBonds2Residues 
atomsBonds2Residues ( atoms,  bonds )
  opengl_renderer 
opengl_renderer ()
  opengl_getFloat 
opengl_getFloat ( parameter )
  dihedral 
dihedral (
        p0,
        p1,
        p2,
        p3,
        )
  opengl_vendor 
opengl_vendor ()
  connectMolecule 
connectMolecule ( m )
  pixelFormat 
pixelFormat (
        interpHack,
        tk_window,
        stencil,
        stereo,
        multisample,
        alpha,
        accum,
        )
  sphere_pts 
sphere_pts ( radius,  density )
  distance 
distance ( l,  r )
  operating_system 
operating_system ()
  setPickSelectable 
setPickSelectable ( s )
  xml_quote 
xml_quote ( s )
  OTFPathFinder 
OTFPathFinder ()
Classes   

Mol2io

BondRot

RibbonStyle

RibbonStyleFixed

PseudoBondGroup

PyMol2ioHelper

TrackChanges

Texture

TextureColor

Camera

ChainTrace

BBox

OpenState

GeometryVector

OpenModels

ShaderVariable

TmplResidue

SharedState

PathFinder

CoordSet

Vector

ShaderColor

Sphere

SideViewer

OGLFont

Material

Molecule

Lens

Plane

Link

MSMSModel

Atom

LensViewer

Selectable

RibbonStyleTapered

SpotLight

PseudoBondMgr

PseudoBond

Light

Residue

NoGuiViewer

Shader

SessionPDBio

Element

RibbonXSection

ReadGaussianFCF

DirectionalLight

Model

Root

Ring

Bond

ColorGroup

OSLAbbreviation

Point

Color

MaterialColor

LODControl

TmplAtom

TmplBond

RibbonResidueClass

RibbonStyleWorm

PixelMap

PDBio

Viewer

error

PositionalLight

RibbonData

Xform

Spline

MolResId


This document was automatically generated Fri May 30 21:13:29 2008 by HappyDoc version 3.1