HappyDoc Generated Documentation Class: Residue

. / Trajectory / DCD / MDToolsMarch97 / md_AtomGroup.py / Residue 

A group of atoms with extra information.

Data: type, name, id, segment, prev, next

Methods: r = Residue() r.buildrefs() - assigns residue for atoms (done by Molecule) r.delrefs() - removes references to allow deletion (done by Molecule) r[name] - returns atoms by name (like a dictionary) r.rotate(angle,[units]) - rotate side chain r.phipsi([units]) - returns (phi,psi)

See also: Atom, Molecule, angles

Base Classes   

Residue
  AtomGroup

Methods   
  rotate 
rotate (
        self,
        angle,
        units=angledefault,
        )
  delrefs 
delrefs ( self )
  __getitem__ 
__getitem__ ( self,  name )
Exceptions   

"No such atom."

  phipsi 
phipsi ( self,  units=angledefault )
  __repr__ 
__repr__ ( self )
  buildrefs 
buildrefs ( self )
  __init__ 
__init__ ( self )

This document was automatically generated Thu Nov 15 14:09:05 2007 by HappyDoc version 3.0.a1