[Chimera-users] Chromophore missing

[Eric Pettersen]

It does appear in Chimera's Select menu, but among the standard residues, probably where it shouldn't be.

--Eric

	Eric Pettersen
	UCSF Computer Graphics Lab


> On Dec 16, 2022, at 9:18 AM, Elaine Meng via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
> 
> Hi Marco,
> Hmmm, it may be a bug that this residue does not appear in the Select... Residue menu. 
> 
> However, I can see by looking in the PDB file (or by opening this structure in ChimeraX) that the nonstandard residue name is CH6, so you can 
> 
> disp :CH6
> 
> for example, or do other things to it, e.g. color, select, ...
> 
> select :CH6
> 
> The residue does appear in the ChimeraX menu Select... Residue, so the bug seems to be specific to Chimera.
> 
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
> 
>> On Dec 16, 2022, at 8:49 AM, Marco Sette via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
>> 
>> Dear all,
>> 
>> When I fetch a protein with a chromophore (PDB code 2h5q), the chromophore, not a standard one, is missing, and not present in the Select-Residue menu. Is there any way to obtain it?
>> 
>> Thanks,
>> 
>> Marco
> 
> 
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