[chimerax-users] Ignored bad PDB record found

[Maurício Menegatti Rigo]

Sure, this is my file.

Maurício Menegatti Rigo, *Ph.D.*
Pós-doutorando
Programa de Pós-graduação em Pediatria e Saúde da Criança
Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS)
Porto Alegre, RS, Brasil
Tel: +55 51 3320-3000 (Ramal 6037)
Cel: +55 51 98180-4574
http://lattes.cnpq.br/4948877541502725


*"Fire and Blood"*

2018-01-25 16:01 GMT-02:00 Elaine Meng <meng at cgl.ucsf.edu>:

> Dear Mauricio,
> It’s hard to tell without having the file, or at least part of it that
> gives these messages.  Could send as attachment to the list, or if private,
> just to me.
> Best,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Jan 25, 2018, at 8:55 AM, Maurício Menegatti Rigo <
> mauriciomr1985 at gmail.com> wrote:
> >
> > I don't understand, my .pdb file seems perfectly fine, but I keep
> getting this error:
> >
> > Ignored bad PDB record found on line 1
> > ATOM 1 N ASN A 1 61.433 13.168 52.787 1.00 69.56 N
> >
> > Ignored bad PDB record found on line 2
> > ATOM 2 CA ASN A 1 62.543 13.695 51.962 1.00 69.56 C
> >
> > Ignored bad PDB record found on line 3
> > ATOM 3 C ASN A 1 61.990 14.337 50.735 1.00 69.56 C
> >
> > Ignored bad PDB record found on line 4
> > ATOM 4 O ASN A 1 60.999 13.878 50.167 1.00 69.56 O
> >
> > Ignored bad PDB record found on line 5
> > ATOM 5 CB ASN A 1 63.479 12.547 51.555 1.00 69.56 C
> >
> > 2610 messages similar to the above omitted
> >
> > I can open it in Chimera, PyMol, VMD, among others. But in ChimeraX is
> always the same error. I'm working on Linux (Ubuntu 14.04) with ChimeraX
> version 0.5 (2018-01-24).
> >
> > Any help?
> >
> > Thanks in advance,
> > Mauricio M Rigo, Ph.D
>
>
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