[chimerax-users] Runing multiple command lines in ChimeraX

Elaine Meng meng at cgl.ucsf.edu
Fri Jul 26 10:31:21 PDT 2019


Hello Marie,
The filename suffix for ChimeraX command files is “.cxc”  (“.com” and “.cmd” are suffixes for Chimera, not ChimeraX).
<http://www.cgl.ucsf.edu/chimerax/docs/user/commands/usageconventions.html#cxc-files>

However, in ChimeraX, besides the filename suffix you could use the “open” command with “format cmd”:
<http://www.cgl.ucsf.edu/chimerax/docs/user/commands/open.html#miscellaneous>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jul 26, 2019, at 6:44 AM, Marie Locard-Paulet <marie.locard-paulet at cpr.ku.dk> wrote:
> 
> Hello,
> I am running ChimeraX version 0.9 (2019-02-16) on a Mac (macOS Mojave version 10.14.6). It works fine, and I can work by adding commandes in the command “box” in the bottom. But I would like to open a text file with multiple ChimeraX command lines (for reproducibility and gain of time). 
> I saw the command “open” that should open a document with the suffix “.com” or “.cmd”. It doesn’t work in my hands. It says it does not recognise the suffix. 
> Is there something I am missing?
> Could you please help?
> Kind regards,
> Marie.





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