[chimerax-users] Mouse modes

Tom Goddard goddard at sonic.net
Thu Jun 27 12:33:04 PDT 2019


The ChimeraX menu entry Help / Report a Bug... can also be used to make a feature request such as the centering mouse mode.  That will go into our database of requests -- currently there are 229 open feature requests.

If you want Coot-like behavior you should check out the ISOLDE ChimeraX tool which has to be installed using ChimeraX menu Tools / More Tools....

	Tom


> On Jun 27, 2019, at 12:25 PM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Hi Yazan,
> No. If there was a direct way I would have mentioned it in my previous reply to the same question.  The most similar thing is the pivot mode.
> 
> There’s a “view” command to center on specified objects, but it also zooms.  There is no option to keep scale (zoom) unchanged and  center on some specified object.  The closest thing would be to specify focusing the view on the object and surrounding zone, e.g.
> 
> view sel @<8
> 
> Elaine
> 
>> On Jun 27, 2019, at 11:58 AM, Yazan Abbas <yazan.abbas at gmail.com> wrote:
>> 
>> Hi Elaine, 
>> 
>> Thanks. I was aware of the toolbar but hadn't come across the ui mouse mode page in the user guide. Is there a way to center the view based based on where you click (similar to chimera, pymol, coot)? I think that would be really helpful in combination with cofr centerOfView. It's also a very handy way to navigate maps and models, by clicking on where you want to center.
>> 
>> Yazan
>> 
>> On Wed, Jun 26, 2019 at 12:14 PM Elaine Meng <meng at cgl.ucsf.edu> wrote:
>> Hi Yazan,
>> ChimeraX has very many mouse modes (more than in Chimera) and you can assign functions to three mouse buttons and scroll wheel alone and in combination with Ctrl, Shift, Command, and Alt keys.  See:
>> 
>> <http://rbvi.ucsf.edu/chimerax/docs/user/commands/ui.html#mousemode>
>> 
>> See the “pivot” function. It sets center of rotation but does not put it at the center of window.
>> 
>> There is also a whole section of the Toolbar with icons devoted to assignment of these functions to “right mouse” (or touchpad equivalent):
>> 
>> <http://rbvi.ucsf.edu/chimerax/docs/user/tools/mousemodes.html>
>> 
>> ChimeraX menu: Help… User Guide will show an index of general topics, tools, and commands, with links to their individual help pages.  That’s a good place to look first for information. The mousemodes are mentioned near the top of this User Guide index.
>> 
>> I hope this helps,
>> Elaine
>> -----
>> Elaine C. Meng, Ph.D.
>> UCSF Chimera(X) team
>> Department of Pharmaceutical Chemistry
>> University of California, San Francisco
>> 
>>> On Jun 26, 2019, at 5:47 AM, Yazan Abbas <yazan.abbas at gmail.com> wrote:
>>> 
>>> Hi, 
>>> 
>>> Apologies if this has been posted before, still new to chimerax and the mailing list. Was wondering if there are plans to add support for modifying mouse keys with ctrl (similar to what is in chimera). I am also wondering if there are plans to create a recenter + change pivot button/function that is also part of chimera.
>>> 
>>> Thanks, 
>>> 
>>> Yazan
> 
> 
> _______________________________________________
> ChimeraX-users mailing list
> ChimeraX-users at cgl.ucsf.edu
> Manage subscription:
> http://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users
> 





More information about the ChimeraX-users mailing list