[chimerax-users] Missing segments

Eric Pettersen pett at cgl.ucsf.edu
Fri Apr 24 18:10:15 PDT 2020


In Chimera, if there aren’t too many, you could select them with the mouse and then bring up the Selection Inspector (magnifying glass icon in the lower right corner of the Chimera window) and change “displayed” to “false”.

—Eric

> On Apr 23, 2020, at 10:10 PM, Daniel Asarnow <asarnow at msg.ucsf.edu> wrote:
> 
> I upgraded to the latest release ChimeraX (and Isolde) and this only happens when the CIF is then opened in old Chimera. In X it's fine.
> 
> Best,
> -da
> 
> On Wed, Apr 22, 2020 at 11:04 PM Daniel Asarnow <asarnow at msg.ucsf.edu <mailto:asarnow at msg.ucsf.edu>> wrote:
> It's 0.92 nightly from March 8th, I'm running the ISOLDE beta from that time. I'll update to the 0.93 release and see what happens.
> 
> Also, I'm running Windows.
> 
> Thanks!
> 
> -da
> 
> On Wed, Apr 22, 2020 at 10:56 PM Tristan Croll <tic20 at cam.ac.uk <mailto:tic20 at cam.ac.uk>> wrote:
> Is your ChimeraX version up to date? That used to be an issue, but I haven’t seen it for quite a while now.
> 
> 
> 
> 
> 
> 
> > On 23 Apr 2020, at 06:51, Daniel Asarnow <asarnow at msg.ucsf.edu <mailto:asarnow at msg.ucsf.edu>> wrote:
> > 
> > Hi all,
> > When I save a CIF from ChimeraX, the missing segment pseudobonds are replaced by real (super unphysical) bonds. Can I do something about it, or is this a bug?
> > 
> > Thanks and best,
> > -da
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