[chimerax-users] Fit map in map and save result map

[Luis José Castillo Valverde]

Hello,


Thank you very much for your help, I already managed to save the map
correctly.


Best regards,


Luis

El mié., 5 de ago. de 2020 a la(s) 10:18, Elaine Meng (meng at cgl.ucsf.edu)
escribió:

> Hi Luis,
> You would need to generate a new map from resampling the fitted map on the
> grid of the other using "volume resample".  In general you lose some
> resolution by the resampling, as discussed in the links below.
> <http://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#resample>
> <http://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#notes>
>
> If map #1 is fitted to #2, you could generate a resampled map with command
> something like
>
> volume resample #1 onGrid #2
>
> ...which would make new map #3 (if that number isn't already in use).
> However, you may want to use additional options to the command, which are
> explained in the links above, e.g. the "spacing" option for finer spacing.
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Aug 4, 2020, at 7:30 PM, Luis José Castillo Valverde <
> luis.castillo.valverde.98 at gmail.com> wrote:
> >
> > Hello,
> > I know that the ones I am going to ask maybe a recurring question but I
> have not managed to solve it. I know that maps as such do not have location
> or rotation information, but I want to generate a new map (with a new cube
> I imagine) which represents the current position and rotation for a given
> map. I am working with "fitmap (map # 1) inmap (map # 2)" the idea is to
> generate the new map from the optimized map, to be able to load that new
> "result" map without the need to perform any other transformation. If this
> is possible, I wanted to know if you can give me the command list to be
> able to do it? I already appreciate the attention provided.
> > Best regards,
> > Luis
> >
>
>

-- 

Luis José Castillo Valverde
Ingeniero en Computación, TEC Costa Rica
Estudiante de maestría (MSc) académica en Computación, TEC Costa Rica
Telegram: @LCastillo98
LinkedIn: luisjosecastillo98
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