[chimerax-users] Chimerax 1.2.5 Ubuntu 16.04 failed to start

Zhou, Bing-Rui (NIH/NCI) [E] bing-rui.zhou at nih.gov
Tue Jun 22 07:17:56 PDT 2021


Thank you Greg. The new version 1.2.5.1 works fine.
Bing-Rui

From: Greg Couch <gregc at cgl.ucsf.edu>
Date: Tuesday, June 15, 2021 at 10:16 PM
To: "Zhou, Bing-Rui (NIH/NCI) [E]" <bing-rui.zhou at nih.gov>, "ChimeraX-users at cgl.ucsf.edu" <ChimeraX-users at cgl.ucsf.edu>
Subject: Re: [chimerax-users] Chimerax 1.2.5 Ubuntu 16.04 failed to start


Thank you for reporting this.  There is a missing dependency on the libxcb-xinerama0 package.  Please install it with:

    sudo apt install libxcb-xinerama0

and then try ChimeraX 1.2.5 again.  This bug is also present in the current Ubuntu 18.04 and 20.04 downloads.  It will be fixed within 24 hours.

    -- Greg
On 6/13/2021 7:31 AM, Zhou, Bing-Rui (NIH/NCI) [E] via ChimeraX-users wrote:
Hello ChimeraX developer,

I am trying to update ChimeraX from v1.1 to v1.2.5 on a Ubuntu 16.04 Linux machine, but Chimerax v1.2.5 failed to start with the following error message:

> sudo apt-get install ~/Downloads/ucsf-chimerax_1.2.5_amd64.deb
>chimerax
qt.qpa.plugin: Could not load the Qt platform plugin "xcb" in "" even though it was found.
This application failed to start because no Qt platform plugin could be initialized. Reinstalling the application may fix this problem.

Available platform plugins are: eglfs, linuxfb, minimal, minimalegl, offscreen, vnc, wayland-egl, wayland, wayland-xcomposite-egl, wayland-xcomposite-glx, xcb.

Fatal Python error: Aborted

Current thread 0x00007f5866636700 (most recent call first):
  File "/usr/lib/ucsf-chimerax/lib/python3.8/site-packages/chimerax/ui/gui.py", line 157 in __init__
  File "/usr/lib/ucsf-chimerax/lib/python3.8/site-packages/ChimeraX_main.py", line 577 in init
  File "/usr/lib/ucsf-chimerax/lib/python3.8/site-packages/ChimeraX_main.py", line 1015 in <module>
  File "/usr/lib/ucsf-chimerax/lib/python3.8/runpy.py", line 87 in _run_code
  File "/usr/lib/ucsf-chimerax/lib/python3.8/runpy.py", line 194 in _run_module_as_main
Aborted (core dumped)

I could downgrade to ChimeraX v1.1 and it works fine, just wondering what has changed in v1.2.5 and if there is a fix for this issue.

Thanks,
Bing-Rui



_______________________________________________

ChimeraX-users mailing list

ChimeraX-users at cgl.ucsf.edu<mailto:ChimeraX-users at cgl.ucsf.edu>

Manage subscription:

https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimerax-users/attachments/20210622/a87e9776/attachment-0001.html>


More information about the ChimeraX-users mailing list