[chimerax-users] how to save .pdb file of predicted fusion protein generated by chimerax and alphafold

[Elaine Meng]

Hi Ruby,
You can use either the ChimeraX menu: File... Save (choose Files of type: PDB in the dialog, browse to the the intended save location, etc.) or the "save" command:
<https://rbvi.ucsf.edu/chimerax/docs/user/commands/save.html#pdb>

To see the User Guide, use menu: Help... User Guide.
Regards,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Sep 15, 2021, at 5:18 AM, Ruby Pelingon via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
> 
> Hi, 
> I tried using chimeraX and alphafold to predict my fusion protein. The result seems promising and generated a .pdb file. I would like to enquire how to save the .pdb file. I would like to open the .pdb file using pymol. Thank you. 
> Kind Regards,
> Ruby Pelingon
>