[chimerax-users] how to save .pdb file of predicted fusion protein generated by chimerax and alphafold

[Ruby Pelingon]

Hi Elaine,

Thank you very much. I actually figured it out as soon after I sent the enquiry email. :)) Sorry about that. Thank you again for your reply.

Kind Regards,
Ruby Pelingon


> On 16 Sep 2021, at 1:30 am, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Hi Ruby,
> You can use either the ChimeraX menu: File... Save (choose Files of type: PDB in the dialog, browse to the the intended save location, etc.) or the "save" command:
> <https://rbvi.ucsf.edu/chimerax/docs/user/commands/save.html#pdb>
> 
> To see the User Guide, use menu: Help... User Guide.
> Regards,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
>> On Sep 15, 2021, at 5:18 AM, Ruby Pelingon via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
>> 
>> Hi, 
>> I tried using chimeraX and alphafold to predict my fusion protein. The result seems promising and generated a .pdb file. I would like to enquire how to save the .pdb file. I would like to open the .pdb file using pymol. Thank you. 
>> Kind Regards,
>> Ruby Pelingon
>>