[chimerax-users] Imod map values

[HONG ZHAN]

Thanks Tom:D

Hong

> On Aug 25, 2022, at 5:42 PM, Tom Goddard <goddard at sonic.net> wrote:
> 
> Hi Hong,
> 
> I guess you mean you want to change the sign of the density map values.  The following ChimeraX command does that
> 
> 	volume scale #1 factor -1
> 
> And if you wanted to save that map you could use
> 
> 	save mynewmap.mrc model #1
> 
>  Tom
> 
> 
>> On Aug 25, 2022, at 12:59 PM, HONG ZHAN via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
>> 
>> Dear all, 
>> 
>> It might be not a good question regarding chimeraX. I have a PEET generated averaged map and output of PEET is reversed vs. single particle maps. What is a good function to change the density of PEET output? I used newstack -multadd -1,0 function in imod, however it gave -137 level… 
>> 
>> Thanks!
>> Hong
>> 
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>