[chimerax-users] color zone with markers

HUI WANG logicvay2010 at g.ucla.edu
Fri Jul 8 14:05:13 PDT 2022


Dear Elaine,

This really helps! Thanks!

Best regards,
Hui



On Fri, Jul 8, 2022 at 1:33 PM Elaine Meng <meng at cgl.ucsf.edu> wrote:

> Dear Hui,
> The "color zone" command has a "bondPointSpacing" option to also use the
> coloring of bonds ( = links in marker models).
>
> <https://rbvi.ucsf.edu/chimerax/docs/user/commands/color.html#zone>
>
> Although there is also a Color Zone tool (GUI) I don't think it includes
> that option specifically, so you would need to use the command.
> <https://rbvi.ucsf.edu/chimerax/docs/user/tools/colorzone.html>
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Jul 8, 2022, at 12:57 PM, HUI WANG via ChimeraX-users <
> chimerax-users at cgl.ucsf.edu> wrote:
> >
> > Dear Developers,
> > I have a need to color a huge ring-like structure with markers, I used
> to know that we could color the density by the markers as well as the links
> between them, so It's not necessary to have too many markers.
> > However, I cannot figure out how to color the density covered by the
> links now. I am using ChimeraX 1.3. Any comments or suggestions will be
> appreciated! Thanks!
> > Best regards,
> > Hui
>
>
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