[chimerax-users] Developing a ChimeraX bundle - accessing programmatically ChimeraX(GUI open) session

[Tom Goddard]

Hi Stel,

  Here is an example using Python to interactively inspect atomic model data in ChimeraX

	https://rbvi.github.io/chimerax-recipes/inspect/inspect.html <https://rbvi.github.io/chimerax-recipes/inspect/inspect.html>

And there are other examples using Python with ChimeraX on the ChimeraX Recipes web page

	https://rbvi.github.io/chimerax-recipes/ <https://rbvi.github.io/chimerax-recipes/>

and information about the Python atomic data structures in the ChimeraX Programming Guide

	https://www.cgl.ucsf.edu/chimerax/docs/devel/modules.html <https://www.cgl.ucsf.edu/chimerax/docs/devel/modules.html>

  Tom


> On Nov 23, 2022, at 2:55 AM, Stylianos Iliadis via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
> 
> Hello,
>  
> I would like to develop a small bundle-plugin for automatically annotating residue labels in protein structures. I tried to access ChimeraX via command line when ChimeraX was running (GUI open) with an opened protein structure in order to study the structure objects hierarchy( chain ->residue ->atoms). This would help me understand it better and code accordingly. Unfortunately, I didn’t manage to do so.
>  
> Could you please suggest me a way, a page or terminal where I could read more about the internal structure of ChimeraX and if possible to programmatically access a session when it’s running in ChimeraX.
>  
> Kind regards,
> Stel Iliadis
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