[chimerax-users] fitmap command in chimerax
Elaine Meng
meng at cgl.ucsf.edu
Wed Sep 21 11:07:45 PDT 2022
Hi Yanhe,
I could not reproduce this problem. Even if I have the two copies of the same atomic model in exactly the same place before I run the command:
fitmap #2,3 inMap #1 seq 2 res 3.7
... they go to different places. But if you use "shift false" it will prevent shifting during fitting, so I don't think you want to use that option.
I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On Sep 21, 2022, at 8:17 AM, Yanhe Zhao via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
>
> Greeting there developer,
>
> I am using fitmap command of chimerax to fit pdb to map, the command as below:
> fitmap #2,3 inMap #1 seq 2 res 3.7
> #2 and #3 are copy of each other and I manually placed them in different positions in map,
> #2 and #3 come to same position after the command running, I had shift option false, but come to same result.
> I remember it works in chimera.
> Could you please point me out?
>
> Thanks and have a nice day,
> Yanhe
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