[chimerax-users] Reasign secondary structure for back-bone trace

[Enrico Martinez]

Hey Eric,
actually I am using a backbone subset defined by Gromacs during the
computing. Are you talking about backbone or main-chain sub-space?
I am using the latest version of ChimeraX but also I do have a ChimeraX
daily installed on the same machine..
Cheers,
Enrico

Il giorno mar 17 gen 2023 alle ore 19:19 Eric Pettersen <pett at cgl.ucsf.edu>
ha scritto:

> Hi Enrico,
>         Do you have all the backbone atoms, including the backbone
> oxygen?  What version of ChimeraX are you using?
>
> --Eric
>
>         Eric Pettersen
>         UCSF Computer Graphics Lab
>
>
> > On Jan 17, 2023, at 7:26 AM, Enrico Martinez via ChimeraX-users <
> chimerax-users at cgl.ucsf.edu> wrote:
> >
> > Dear Chimera-X users!
> > I am working on the visualization of a trajectory containing only
> back-bone atoms of the protein obtained from the PCA. When I load this
> multi-pdb ensemble to Chimera-X I can see only back-bone traces without any
> secondary structure information. I've tried to use dssp command to
> re-assign the secondary structure but it did not change the visualization
> state. Would it be possible to do it in some automatic fashion via some
> built-in command?
> > Many thanks in advance
> > Cheers
> > Enrico
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>
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