UCSF Chimera Workshop

UC Irvine

March 30, 2005


Agenda
9:00
-
10:45
Introduction to UCSF Chimera



Welcome & Overview



Introductory Tutorial (Basic Usage Reference)



Hands-on session
10:45
-
11:00
Break
11:00
-
12:00
Publication/Presentation images and animations



Producing Images and Movies in Chimera



Hands-on session
12:00
-
1:30
Lunch
1:20
-
2:30
Exploring sequence-structure relationships (Multalign)



Presentation/Demo



Hands-on session
2:30
-
3:15
Screening docked ligands (ViewDock & MDMovie)



Presentation/Demo



Hands-on session
3:15
-
3:30
Break
3:30
-
5:00
Virus capsid and density map visualization (Multiscale, volume viewer, volume path tracing)



Presentation/Demo



Hands-on session
5:00
-
5:15
Wrap-up
5:15
-
6:00
Advanced topics



Extending & customizing Chimera



Adding keyboard accelerators



Defining & calculating molecular attributes



Writing Chimera demos

Useful Links